RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 TAF6P49848 677 aa16.43■□□□□ 0.22
SNX29P1-201ENST00000548357 FOXK2Q01167 660 aa16.43■□□□□ 0.22
SNX29P1-201ENST00000548357 ARMCX5Q6P1M9 558 aa16.43■□□□□ 0.22
SNX29P1-201ENST00000548357 PKN3Q6P5Z2 889 aa16.43■□□□□ 0.22
SNX29P1-201ENST00000548357 OSTM1Q86WC4 334 aa16.43■□□□□ 0.22
SNX29P1-201ENST00000548357 C1orf127Q8N9H9 656 aa16.43■□□□□ 0.22
SNX29P1-201ENST00000548357 POMGNT1Q8WZA1 660 aa16.43■□□□□ 0.22
SNX29P1-201ENST00000548357 TSPAN18Q96SJ8 248 aa16.43■□□□□ 0.22
SNX29P1-201ENST00000548357 FAM213AQ9BRX8 229 aa16.43■□□□□ 0.22
SNX29P1-201ENST00000548357 SLC46A2Q9BY10 475 aa16.43■□□□□ 0.22
SNX29P1-201ENST00000548357 ABI2Q9NYB9 513 aaPredicted RBP16.43■□□□□ 0.22
SNX29P1-201ENST00000548357 CCL26Q9Y258 94 aa16.43■□□□□ 0.22
SNX29P1-201ENST00000548357 MYH10P35580 1976 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 MYBPHLA2RUH7 354 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 K7ESF4 209 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 TADA3O75528 432 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 HAPLN1P10915 354 aaPredicted RBP16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 HMGA1P17096 107 aaKnown RBP16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 POLR2BP30876 1174 aaKnown RBP16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 PON2Q15165 354 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 L1TD1Q5T7N2 865 aaKnown RBP16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 DGLUCYQ7Z3D6 616 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 YAF2Q8IY57 180 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 KRI1Q8N9T8 703 aaKnown RBP16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 FAM200AQ8TCP9 573 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 CSGALNACT1Q8TDX6 532 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 USP28Q96RU2 1077 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 PANK2Q9BZ23 570 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 GPR88Q9GZN0 384 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 MRPL44Q9H9J2 332 aaKnown RBP16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 STK17AQ9UEE5 414 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 L1RE1Q9UN81 338 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 ASB3Q9Y575 518 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 SRPRBQ9Y5M8 271 aaKnown RBP16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 PTPRJQ12913 1337 aa16.42■□□□□ 0.22
SNX29P1-201ENST00000548357 OTOL1A6NHN0 477 aaPredicted RBP16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 KPNA7A9QM74 516 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 CHURC1-FNTBB4DL54 471 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 TULP1O00294 542 aaPredicted RBP16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 ITGB3P05106 788 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 SYT1P21579 422 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 SCP2P22307 547 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 ACAT1P24752 427 aaKnown RBP16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 FNTBP49356 437 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 KPNA1P52294 538 aaPredicted RBP16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 LMBRD2Q68DH5 695 aaPredicted RBP16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 NAIF1Q69YI7 327 aaPredicted RBP16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 TRIM68Q6AZZ1 485 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 SLFN12LQ6IEE8 588 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 BRSK2Q8IWQ3 736 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 PDCL2Q8N4E4 241 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 HPS3Q969F9 1004 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 HVCN1Q96D96 273 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 PKMYT1Q99640 499 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 CBWD1Q9BRT8 395 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 PI4K2AQ9BTU6 479 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 PCIF1Q9H4Z3 704 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 TASP1Q9H6P5 420 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 POLR3BQ9NW08 1133 aaPredicted RBP16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 HSFX1Q9UBD0 423 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 SIX4Q9UIU6 781 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 NUP205Q92621 2012 aa16.41■□□□□ 0.22
SNX29P1-201ENST00000548357 FRMD3A2A2Y4 597 aa16.4■□□□□ 0.22
SNX29P1-201ENST00000548357 HRO43593 1189 aa16.4■□□□□ 0.22
SNX29P1-201ENST00000548357 PRPF6O94906 941 aaKnown RBP16.4■□□□□ 0.22
SNX29P1-201ENST00000548357 GCNT3O95395 438 aa16.4■□□□□ 0.22
SNX29P1-201ENST00000548357 F11P03951 625 aa16.4■□□□□ 0.22
SNX29P1-201ENST00000548357 PUM1Q14671 1186 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNX29P1-201ENST00000548357 RRAGBQ5VZM2 374 aa16.4■□□□□ 0.22
SNX29P1-201ENST00000548357 ITIH5Q86UX2 942 aa16.4■□□□□ 0.22
SNX29P1-201ENST00000548357 E2F7Q96AV8 911 aa16.4■□□□□ 0.22
SNX29P1-201ENST00000548357 HPS4Q9NQG7 708 aa16.4■□□□□ 0.22
SNX29P1-201ENST00000548357 AGAP1Q9UPQ3 857 aa16.4■□□□□ 0.22
SNX29P1-201ENST00000548357 MTMR6Q9Y217 621 aa16.4■□□□□ 0.22
SNX29P1-201ENST00000548357 CXCL12P48061 93 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 CCR3P51677 355 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 NLRP12P59046 1061 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 TFAMQ00059 246 aaKnown RBP16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 CCINQ13939 588 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 SV2CQ496J9 727 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 ARHGAP15Q53QZ3 475 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 TXNDC8Q6A555 127 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 HEATR6Q6AI08 1181 aaKnown RBP16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 MAMSTRQ6ZN01 415 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 SV2BQ7L1I2 683 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 METTL23Q86XA0 190 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 MAB21L3Q8N8X9 362 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 SPPL2BQ8TCT7 592 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 BPIFB1Q8TDL5 484 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 USP13Q92995 863 aaPredicted RBP16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 ACCSQ96QU6 501 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 C8orf33Q9H7E9 229 aaPredicted RBP16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 UPF2Q9HAU5 1272 aaKnown RBP16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 PDE11AQ9HCR9 933 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 OBP2AQ9NY56 170 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 DSEQ9UL01 958 aa16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 TPRP12270 2363 aaKnown RBP16.39■□□□□ 0.21
SNX29P1-201ENST00000548357 CNOT1A5YKK6 2376 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms