RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 LINC00301Q8NCQ3 95 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 ZSWIM2Q8NEG5 633 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 OR10T2Q8NGX3 314 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 SHKBP1Q8TBC3 707 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 ZSCAN18Q8TBC5 510 aaPredicted RBP7.24□□□□□ -1.25
SCAF11-211ENST00000547950 HPS3Q969F9 1004 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 HVCN1Q96D96 273 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 ZNF396Q96N95 335 aaPredicted RBP7.24□□□□□ -1.25
SCAF11-211ENST00000547950 ASB16Q96NS5 453 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 NELL2Q99435 816 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 SPSB2Q99619 263 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 SEPT5Q99719 369 aaPredicted RBP7.24□□□□□ -1.25
SCAF11-211ENST00000547950 STRA6Q9BX79 667 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 BCO2Q9BYV7 579 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 DNAJC25Q9H1X3 360 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 SPATA6Q9NWH7 488 aaPredicted RBP7.24□□□□□ -1.25
SCAF11-211ENST00000547950 DLGAP2Q9P1A6 1054 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 DSEQ9UL01 958 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 AGAP1Q9UPQ3 857 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 C2CD2Q9Y426 696 aa7.24□□□□□ -1.25
SCAF11-211ENST00000547950 HEPACAM2A8MVW5 462 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 KPNA7A9QM74 516 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 ZNF263O14978 683 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 GPR37O15354 613 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 NCAM2O15394 837 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 LDHAP00338 332 aaKnown RBP7.23□□□□□ -1.25
SCAF11-211ENST00000547950 ITGB3P05106 788 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 CYP11A1P05108 521 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 KRT19P08727 400 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 SP9P0CG40 484 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 PSMC3P17980 439 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 GARTP22102 1010 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 FCARP24071 287 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 POLR2BP30876 1174 aaKnown RBP7.23□□□□□ -1.25
SCAF11-211ENST00000547950 TUFMP49411 452 aaKnown RBP7.23□□□□□ -1.25
SCAF11-211ENST00000547950 EPHA5P54756 1037 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 WNT7BP56706 349 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 POU5F1Q01860 360 aaKnown RBP7.23□□□□□ -1.25
SCAF11-211ENST00000547950 CSTF1Q05048 431 aaKnown RBP7.23□□□□□ -1.25
SCAF11-211ENST00000547950 TAF12Q16514 161 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 SV2CQ496J9 727 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 STXBP5Q5T5C0 1151 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 SCARA3Q6AZY7 606 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 ZNF787Q6DD87 383 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 VITQ6UXI7 678 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 LRRTM3Q86VH5 581 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 ARID3BQ8IVW6 561 aaPredicted RBP7.23□□□□□ -1.25
SCAF11-211ENST00000547950 CCDC65Q8IXS2 484 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 YAF2Q8IY57 180 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 EFCAB13Q8IY85 973 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 GLIS3Q8NEA6 775 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 TTC8Q8TAM2 541 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 GIPC2Q8TF65 315 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 CACTINQ8WUQ7 758 aaKnown RBP7.23□□□□□ -1.25
SCAF11-211ENST00000547950 IRF7Q92985 503 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 DHX58Q96C10 678 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 BORCS6Q96GS4 357 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 FAM84AQ96KN4 292 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 LPIN3Q9BQK8 851 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 CBWD1Q9BRT8 395 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 DDX23Q9BUQ8 820 aaKnown RBP7.23□□□□□ -1.25
SCAF11-211ENST00000547950 LRRC3Q9BY71 257 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 FGFBP2Q9BYJ0 223 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 LRRC27Q9C0I9 530 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 GPR88Q9GZN0 384 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 ZCWPW1Q9H0M4 648 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 ATXN3LQ9H3M9 355 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 TMEM206Q9H813 350 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 LTB4R2Q9NPC1 389 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 OLFML3Q9NRN5 406 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 ABI2Q9NYB9 513 aaPredicted RBP7.23□□□□□ -1.25
SCAF11-211ENST00000547950 RBAKQ9NYW8 714 aaPredicted RBP7.23□□□□□ -1.25
SCAF11-211ENST00000547950 NDRG2Q9UN36 371 aaKnown RBP7.23□□□□□ -1.25
SCAF11-211ENST00000547950 MRPS17Q9Y2R5 130 aaKnown RBP7.23□□□□□ -1.25
SCAF11-211ENST00000547950 ASB3Q9Y575 518 aa7.23□□□□□ -1.25
SCAF11-211ENST00000547950 ZNF318Q5VUA4 2279 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 PLXNA3P51805 1871 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 FRMD3A2A2Y4 597 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 MAN2B1O00754 1011 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 POLR2DO15514 142 aaKnown RBP7.22□□□□□ -1.25
SCAF11-211ENST00000547950 LAMTOR5O43504 91 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 EXTL3O43909 919 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 CUTAO60888 179 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 PPP6R2O75170 966 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 ACAT1P24752 427 aaKnown RBP7.22□□□□□ -1.25
SCAF11-211ENST00000547950 TARSP26639 723 aaKnown RBP7.22□□□□□ -1.25
SCAF11-211ENST00000547950 GABRR2P28476 465 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 RBP5P82980 135 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 AMPD3Q01432 767 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 BFSP1Q12934 665 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 ALCAMQ13740 583 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 VEPH1Q14D04 833 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 GPR158Q5T848 1215 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 SHC4Q6S5L8 630 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 STXBP4Q6ZWJ1 553 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 GAREM2Q75VX8 874 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 ITIH5Q86UX2 942 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 NT5DC4Q86YG4 428 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 TMC8Q8IU68 726 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 MFSD6LQ8IWD5 586 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms