RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 PCIF1Q9H4Z3 704 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 NENFQ9UMX5 172 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 NCANO14594 1321 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 SERPINB7O75635 380 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 ATF7P17544 494 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 SMARCA1P28370 1054 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 PSMC1P62191 440 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 TRIM28Q13263 835 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 TLR1Q15399 786 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 OGFOD2Q6N063 350 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 TMIGD2Q96BF3 282 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 PPP1R14BQ96C90 147 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 IKZF4Q9H2S9 585 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 INPP5FQ9Y2H2 1132 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 TELO2Q9Y4R8 837 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 BANF1O75531 89 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 PCP11498 1178 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 PHBP35232 272 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 SLC5A3P53794 718 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 ACTR3P61158 418 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 CDK16Q00536 496 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 MSLNQ13421 630 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 FASTKD3Q14CZ7 662 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 FAM182AQ5T1J6 154 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 FOXR2Q6PJQ5 311 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 LPCAT2Q7L5N7 544 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 SCFD1Q8WVM8 642 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 C7orf43Q8WVR3 580 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 DNAJC19Q96DA6 116 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 PPP1R10Q96QC0 940 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 ANKRD2Q9GZV1 360 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 BHMT2Q9H2M3 363 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 OLFML3Q9NRN5 406 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 TYW1Q9NV66 732 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 VPS51Q9UID3 782 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 TMED5Q9Y3A6 229 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 DTNAQ9Y4J8 743 aa12.53□□□□□ -0.4
RBFOX1-208ENST00000547372 PCYT1AP49585 367 aa12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 YWHAGP61981 247 aaKnown RBP eCLIP12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 MRPS9P82933 396 aaKnown RBP12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 PDIA2Q13087 525 aaKnown RBP12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 OASLQ15646 514 aaKnown RBP12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 USH1GQ495M9 461 aa12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 RALGPS1Q5JS13 557 aa12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 PCNX4Q63HM2 1172 aa12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 SLC20A1Q8WUM9 679 aa12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 KCNN1Q92952 543 aa12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 MAML3Q96JK9 1138 aa12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 EIF2AQ9BY44 585 aaKnown RBP12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 PSTPIP2Q9H939 334 aa12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 S100A14Q9HCY8 104 aa12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 CROTQ9UKG9 612 aa12.52□□□□□ -0.4
RBFOX1-208ENST00000547372 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
RBFOX1-208ENST00000547372 MIF4GDA9UHW6 222 aaKnown RBP12.52□□□□□ -0.41
RBFOX1-208ENST00000547372 ADAM23O75077 832 aa12.52□□□□□ -0.41
RBFOX1-208ENST00000547372 S100BP04271 92 aaPredicted RBP12.52□□□□□ -0.41
RBFOX1-208ENST00000547372 SUSD4Q5VX71 490 aa12.52□□□□□ -0.41
RBFOX1-208ENST00000547372 ARID3BQ8IVW6 561 aaPredicted RBP12.52□□□□□ -0.41
RBFOX1-208ENST00000547372 TEKT1Q969V4 418 aa12.52□□□□□ -0.41
RBFOX1-208ENST00000547372 CCT7Q99832 543 aa12.52□□□□□ -0.41
RBFOX1-208ENST00000547372 DMTF1Q9Y222 760 aa12.52□□□□□ -0.41
RBFOX1-208ENST00000547372 CCDC88AQ3V6T2 1871 aa12.52□□□□□ -0.41
RBFOX1-208ENST00000547372 ERVV-2B6SEH9 535 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 MAGEB2O15479 319 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 CYTH3O43739 400 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 ALAS1P13196 640 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 MSX2P35548 267 aaPredicted RBP12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 IRX4P78413 519 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 PDCD4Q53EL6 469 aaKnown RBP12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 ARSHQ5FYA8 562 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 MAP3K21Q5TCX8 1036 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 METTL21CQ5VZV1 264 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 NET1Q7Z628 596 aaPredicted RBP12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 THAP11Q96EK4 314 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 SNX27Q96L92 541 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 CFAP57Q96MR6 1250 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 FAM111AQ96PZ2 611 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 RIOK1Q9BRS2 568 aaKnown RBP12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 BRIP1Q9BX63 1249 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 ZNF395Q9H8N7 513 aaPredicted RBP12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 TBC1D23Q9NUY8 699 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 SMG5Q9UPR3 1016 aaKnown RBP12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 MTO1Q9Y2Z2 717 aaKnown RBP12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 GPC6Q9Y625 555 aaPredicted RBP12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 H0YIN7 160 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 UBAP2LQ14157 1087 aaKnown RBP12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 C6orf52Q5T4I8 152 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 CTAGE3PQ8IX95 158 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 FAM172AQ8WUF8 416 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 TTC25Q96NG3 672 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 CAAP1Q9H8G2 361 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 FADS3Q9Y5Q0 445 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 ZMYM2Q9UBW7 1377 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 USP54Q70EL1 1684 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 A0A1B0GTW7 788 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 SLC37A4O43826 429 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 AKAP3O75969 853 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 CAMTA2O94983 1202 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 NR3C1P04150 777 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms