RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 TMLHEQ9NVH6 421 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 HSPBP1Q9NZL4 362 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 ITGA11Q9UKX5 1188 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 L1RE1Q9UN81 338 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 AGAP1Q9UPQ3 857 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 CACNA1AO00555 2505 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 WDR87Q6ZQQ6 2873 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 UBE4BO95155 1302 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 PVALEFA0A1B0GWK0 134 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 A0A1W2PRU2 124 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 PRR23AA6NEV1 266 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 PROB1E7EW31 1015 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 KLRC4O43908 158 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 LRRN2O75325 713 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 DCNP07585 359 aaKnown RBP11.1□□□□□ -0.63
BEST3-208ENST00000547208 NBL1P41271 181 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 AFMP43652 599 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 ALDH1A3P47895 512 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 EPHB3P54753 998 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 SLC44A4Q53GD3 710 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 STXBP5Q5T5C0 1151 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 LMBRD2Q68DH5 695 aaPredicted RBP11.1□□□□□ -0.63
BEST3-208ENST00000547208 VITQ6UXI7 678 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 LIMS2Q7Z4I7 341 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 DNAJB7Q7Z6W7 309 aaPredicted RBP11.1□□□□□ -0.63
BEST3-208ENST00000547208 METTL23Q86XA0 190 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 CSGALNACT2Q8N6G5 542 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 ZSCAN18Q8TBC5 510 aaPredicted RBP11.1□□□□□ -0.63
BEST3-208ENST00000547208 CACTINQ8WUQ7 758 aaKnown RBP11.1□□□□□ -0.63
BEST3-208ENST00000547208 LEO1Q8WVC0 666 aaPredicted RBP11.1□□□□□ -0.63
BEST3-208ENST00000547208 SMARCD2Q92925 531 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 RSPRY1Q96DX4 576 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 PKMYT1Q99640 499 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 ZFP14Q9HCL3 533 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 INTS13Q9NVM9 706 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 GDAP2Q9NXN4 497 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 FAM13BQ9NYF5 915 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 SERTAD1Q9UHV2 236 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 HPSEQ9Y251 543 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 MTF2Q9Y483 593 aaPredicted RBP11.1□□□□□ -0.63
BEST3-208ENST00000547208 MYO16Q9Y6X6 1858 aa11.1□□□□□ -0.63
BEST3-208ENST00000547208 KANSL1LA0AUZ9 987 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 MED19A0JLT2 244 aaPredicted RBP11.09□□□□□ -0.63
BEST3-208ENST00000547208 ZNF233A6NK53 670 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 ARNTLO00327 626 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 HCRTO43612 131 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 SLFN14P0C7P3 912 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 HAPLN1P10915 354 aaPredicted RBP11.09□□□□□ -0.63
BEST3-208ENST00000547208 VIPR2P41587 438 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 PFKPQ01813 784 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 PRKCQQ04759 706 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 SMARCB1Q12824 385 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 GRM2Q14416 872 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 ANGPT1Q15389 498 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 SNRNP35Q16560 246 aaKnown RBP11.09□□□□□ -0.63
BEST3-208ENST00000547208 CCDC142Q17RM4 750 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 SOWAHAQ2M3V2 549 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 FRMD5Q7Z6J6 570 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 OSTM1Q86WC4 334 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 NELFCDQ8IXH7 590 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 THEM5Q8N1Q8 247 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 KIAA0895Q8NCT3 520 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 NOC3LQ8WTT2 800 aaKnown RBP11.09□□□□□ -0.63
BEST3-208ENST00000547208 C2orf15Q8WU43 125 aaKnown RBP11.09□□□□□ -0.63
BEST3-208ENST00000547208 PAGE5Q96GU1 130 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 SEPT5Q99719 369 aaPredicted RBP11.09□□□□□ -0.63
BEST3-208ENST00000547208 LPIN3Q9BQK8 851 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 IL21Q9HBE4 155 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 SLC39A2Q9NP94 309 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 HEBP1Q9NRV9 189 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 SIT1Q9Y3P8 196 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 ASB3Q9Y575 518 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 KIAA1549LQ6ZVL6 1849 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 DMXL1Q9Y485 3027 aa11.09□□□□□ -0.63
BEST3-208ENST00000547208 MYH10P35580 1976 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.08□□□□□ -0.64
BEST3-208ENST00000547208 FAM237AA0A1B0GTK4 181 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 A0A1B0GVL5 298 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 STK25O00506 426 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 GABRDO14764 452 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 CLIC2O15247 247 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 KRT19P08727 400 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 TMEM191BP0C7N4 346 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 PFKFB1P16118 471 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 CD72P21854 359 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 CMA1P23946 247 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 TUFMP49411 452 aaKnown RBP11.08□□□□□ -0.64
BEST3-208ENST00000547208 SNRPFP62306 86 aaKnown RBP11.08□□□□□ -0.64
BEST3-208ENST00000547208 RBP5P82980 135 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 BFSP1Q12934 665 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 FZD5Q13467 585 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 SURF1Q15526 300 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 KNOP1Q1ED39 458 aaKnown RBP11.08□□□□□ -0.64
BEST3-208ENST00000547208 MGAT5BQ3V5L5 792 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 TMEM150AQ86TG1 271 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 WDR49Q8IV35 697 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 C12orf56Q8IXR9 622 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 ZNF687Q8N1G0 1237 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 TMEM86AQ8N2M4 240 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 TOP6BLQ8N6T0 577 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms