RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 KCNH6Q9H252 994 aa15.86■□□□□ 0.13
CCDC38-205ENST00000546947 RMND1Q9NWS8 449 aa15.86■□□□□ 0.13
CCDC38-205ENST00000546947 RAPGEFL1Q9UHV5 662 aa15.86■□□□□ 0.13
CCDC38-205ENST00000546947 HOOK1Q9UJC3 728 aaKnown RBP15.86■□□□□ 0.13
CCDC38-205ENST00000546947 PCDHB5Q9Y5E4 795 aa15.86■□□□□ 0.13
CCDC38-205ENST00000546947 MAPK13O15264 365 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 NARSO43776 548 aaKnown RBP15.85■□□□□ 0.13
CCDC38-205ENST00000546947 STAU1O95793 577 aaKnown RBP15.85■□□□□ 0.13
CCDC38-205ENST00000546947 FAM163BP0C2L3 166 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 PCSK1P29120 753 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 ATICP31939 592 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 CCR2P41597 374 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 TRPC3Q13507 836 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 PNOCQ13519 176 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 NFE2Q16621 373 aaPredicted RBP15.85■□□□□ 0.13
CCDC38-205ENST00000546947 SOWAHAQ2M3V2 549 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 CEP135Q66GS9 1140 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 ITIH5Q86UX2 942 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 TTC9BQ8N6N2 239 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 PLEKHO2Q8TD55 490 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 PSMG2Q969U7 264 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 TCEAL4Q96EI5 215 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 MCRS1Q96EZ8 462 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 GSDMAQ96QA5 445 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 ABI2Q9NYB9 513 aaPredicted RBP15.85■□□□□ 0.13
CCDC38-205ENST00000546947 WNT16Q9UBV4 365 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 FRMD4BQ9Y2L6 1034 aa15.85■□□□□ 0.13
CCDC38-205ENST00000546947 LRRIQ3A6PVS8 624 aaPredicted RBP15.84■□□□□ 0.13
CCDC38-205ENST00000546947 PHACTR2O75167 634 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 MOSPD3O75425 235 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 SMC2O95347 1197 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 FGF19O95750 216 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 HAPLN1P10915 354 aaPredicted RBP15.84■□□□□ 0.13
CCDC38-205ENST00000546947 MYL4P12829 197 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 WARSP23381 471 aaKnown RBP15.84■□□□□ 0.13
CCDC38-205ENST00000546947 RPL13P26373 211 aaKnown RBP15.84■□□□□ 0.13
CCDC38-205ENST00000546947 CASP4P49662 377 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 VEPH1Q14D04 833 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 OSTM1Q86WC4 334 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 TMC8Q8IU68 726 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 ELOA2Q8IYF1 753 aaPredicted RBP15.84■□□□□ 0.13
CCDC38-205ENST00000546947 TMC2Q8TDI7 906 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 SYAP1Q96A49 352 aaPredicted RBP15.84■□□□□ 0.13
CCDC38-205ENST00000546947 MMS19Q96T76 1030 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 SEPT5Q99719 369 aaPredicted RBP15.84■□□□□ 0.13
CCDC38-205ENST00000546947 LRRC3Q9BY71 257 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 GTPBP4Q9BZE4 634 aaKnown RBP15.84■□□□□ 0.13
CCDC38-205ENST00000546947 GPR88Q9GZN0 384 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 SLC2A4RGQ9NR83 387 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 TMLHEQ9NVH6 421 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 FBXL21Q9UKT6 434 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 MAPK8IP1Q9UQF2 711 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 DENND4CQ5VZ89 1909 aa15.84■□□□□ 0.13
CCDC38-205ENST00000546947 NUP210Q8TEM1 1887 aaPredicted RBP15.83■□□□□ 0.12
CCDC38-205ENST00000546947 ECI2O75521 394 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 SOAT2O75908 522 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 PDGFBP01127 241 aaPredicted RBP15.83■□□□□ 0.12
CCDC38-205ENST00000546947 C4BPAP04003 597 aaKnown RBP15.83■□□□□ 0.12
CCDC38-205ENST00000546947 ATF6P18850 670 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 NR2F2P24468 414 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 ACAT1P24752 427 aaKnown RBP15.83■□□□□ 0.12
CCDC38-205ENST00000546947 ENPEPQ07075 957 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 BIRC3Q13489 604 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 COBLL1Q53SF7 1204 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 ZNF658Q5TYW1 1059 aaPredicted RBP15.83■□□□□ 0.12
CCDC38-205ENST00000546947 TDRD10Q5VZ19 366 aaKnown RBP15.83■□□□□ 0.12
CCDC38-205ENST00000546947 DNAJB7Q7Z6W7 309 aaPredicted RBP15.83■□□□□ 0.12
CCDC38-205ENST00000546947 SPATA20Q8TB22 786 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 FAM200AQ8TCP9 573 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 KBTBD7Q8WVZ9 684 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 PKMYT1Q99640 499 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 RPP25Q9BUL9 199 aaKnown RBP15.83■□□□□ 0.12
CCDC38-205ENST00000546947 MFSD1Q9H3U5 465 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 VRTNQ9H8Y1 702 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 ABCB6Q9NP58 842 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 CDH9Q9ULB4 789 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 PTPRDP23468 1912 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 WDFY4Q6ZS81 3184 aa15.83■□□□□ 0.12
CCDC38-205ENST00000546947 ZNF318Q5VUA4 2279 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 IKBKBO14920 756 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 TACC1O75410 805 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 CFHP08603 1231 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 MYL6P60660 151 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 TNNC1P63316 161 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 EDRF1Q3B7T1 1238 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 WDR72Q3MJ13 1102 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 ZCWPW2Q504Y3 356 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 FAM171BQ6P995 826 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 POTEHQ6S545 545 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 INTS8Q75QN2 995 aaKnown RBP15.82■□□□□ 0.12
CCDC38-205ENST00000546947 ST13P5Q8NFI4 369 aaPredicted RBP15.82■□□□□ 0.12
CCDC38-205ENST00000546947 SHKBP1Q8TBC3 707 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 SMARCE1Q969G3 411 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 ELSPBP1Q96BH3 223 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 FUBP3Q96I24 572 aaKnown RBP eCLIP15.82■□□□□ 0.12
CCDC38-205ENST00000546947 ASB16Q96NS5 453 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 PRRX2Q99811 253 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 KXD1Q9BQD3 176 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 LPIN3Q9BQK8 851 aa15.82■□□□□ 0.12
CCDC38-205ENST00000546947 PI4K2AQ9BTU6 479 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms