RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 NECTIN4Q96NY8 510 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 TMEM209Q96SK2 561 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 MRPL45Q9BRJ2 306 aaKnown RBP17.99■□□□□ 0.47
CCDC38-203ENST00000546803 PI4K2AQ9BTU6 479 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 PRKD2Q9BZL6 878 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 NIF3L1Q9GZT8 377 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 NAT10Q9H0A0 1025 aaKnown RBP17.99■□□□□ 0.47
CCDC38-203ENST00000546803 CYP3A43Q9HB55 503 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 CYP4F11Q9HBI6 524 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 CDH9Q9ULB4 789 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 POLIQ9UNA4 740 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 USP15Q9Y4E8 981 aaPredicted RBP17.99■□□□□ 0.47
CCDC38-203ENST00000546803 RFPL2O75678 378 aa17.98■□□□□ 0.47
CCDC38-203ENST00000546803 KCNQ1P51787 676 aa17.98■□□□□ 0.47
CCDC38-203ENST00000546803 SMAD2Q15796 467 aaKnown RBP17.98■□□□□ 0.47
CCDC38-203ENST00000546803 SLC39A12Q504Y0 691 aa17.98■□□□□ 0.47
CCDC38-203ENST00000546803 INTS6LQ5JSJ4 861 aaKnown RBP17.98■□□□□ 0.47
CCDC38-203ENST00000546803 TJAP1Q5JTD0 557 aa17.98■□□□□ 0.47
CCDC38-203ENST00000546803 SPOPLQ6IQ16 392 aa17.98■□□□□ 0.47
CCDC38-203ENST00000546803 C11orf57Q6ZUT1 292 aaPredicted RBP17.98■□□□□ 0.47
CCDC38-203ENST00000546803 OR6B3Q8NGW1 331 aa17.98■□□□□ 0.47
CCDC38-203ENST00000546803 APOL5Q9BWW9 433 aa17.98■□□□□ 0.47
CCDC38-203ENST00000546803 SMYD3Q9H7B4 428 aa17.98■□□□□ 0.47
CCDC38-203ENST00000546803 APOBEC3GQ9HC16 384 aaKnown RBP17.98■□□□□ 0.47
CCDC38-203ENST00000546803 NFE2L3Q9Y4A8 694 aa17.98■□□□□ 0.47
CCDC38-203ENST00000546803 ATG2AQ2TAZ0 1938 aa17.98■□□□□ 0.47
CCDC38-203ENST00000546803 MTMR11A4FU01 709 aa17.97■□□□□ 0.47
CCDC38-203ENST00000546803 XYLBO75191 536 aa17.97■□□□□ 0.47
CCDC38-203ENST00000546803 SEC24AO95486 1093 aa17.97■□□□□ 0.47
CCDC38-203ENST00000546803 BMP1P13497 986 aa17.97■□□□□ 0.47
CCDC38-203ENST00000546803 PRKCSHP14314 528 aaPredicted RBP17.97■□□□□ 0.47
CCDC38-203ENST00000546803 ACAT1P24752 427 aaKnown RBP17.97■□□□□ 0.47
CCDC38-203ENST00000546803 LMO2P25791 158 aa17.97■□□□□ 0.47
CCDC38-203ENST00000546803 ASPAP45381 313 aa17.97■□□□□ 0.47
CCDC38-203ENST00000546803 MTIF2P46199 727 aaKnown RBP17.97■□□□□ 0.47
CCDC38-203ENST00000546803 MAPRE1Q15691 268 aaKnown RBP17.97■□□□□ 0.47
CCDC38-203ENST00000546803 LRRTM3Q86VH5 581 aa17.97■□□□□ 0.47
CCDC38-203ENST00000546803 SPPL2BQ8TCT7 592 aa17.97■□□□□ 0.47
CCDC38-203ENST00000546803 PGLYRP2Q96PD5 576 aa17.97■□□□□ 0.47
CCDC38-203ENST00000546803 SYT15Q9BQS2 421 aa17.97■□□□□ 0.47
CCDC38-203ENST00000546803 BCO2Q9BYV7 579 aa17.97■□□□□ 0.47
CCDC38-203ENST00000546803 DNAJC25Q9H1X3 360 aa17.97■□□□□ 0.47
CCDC38-203ENST00000546803 FAM124BQ9H5Z6 455 aaPredicted RBP17.97■□□□□ 0.47
CCDC38-203ENST00000546803 VWA8A3KMH1 1905 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 A8MXQ7 604 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 LRG1P02750 347 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 PDGFRBP09619 1106 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 TUFMP49411 452 aaKnown RBP17.96■□□□□ 0.47
CCDC38-203ENST00000546803 CDH8P55286 799 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 MYL5Q02045 173 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 DUSP4Q13115 394 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 PLD1Q13393 1074 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 CBX2Q14781 532 aaPredicted RBP17.96■□□□□ 0.47
CCDC38-203ENST00000546803 NFKBIBQ15653 356 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 MAN2A1Q16706 1144 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 FAM171BQ6P995 826 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 SCARA5Q6ZMJ2 495 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 UNC93AQ86WB7 457 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 TTC39CQ8N584 583 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 ATAD1Q8NBU5 361 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 SMG7Q92540 1137 aaKnown RBP17.96■□□□□ 0.47
CCDC38-203ENST00000546803 ELMO3Q96BJ8 720 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 ZNF707Q96C28 371 aaPredicted RBP17.96■□□□□ 0.47
CCDC38-203ENST00000546803 PKMYT1Q99640 499 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 SDCBP2Q9H190 292 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 PIDD1Q9HB75 910 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 ABCB6Q9NP58 842 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.96■□□□□ 0.47
CCDC38-203ENST00000546803 SAMSN1Q9NSI8 373 aaKnown RBP17.96■□□□□ 0.47
CCDC38-203ENST00000546803 PCDHB5Q9Y5E4 795 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 INSL5Q9Y5Q6 135 aa17.96■□□□□ 0.47
CCDC38-203ENST00000546803 SCN1AP35498 2009 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 KCNJ18B7U540 433 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 LRRN2O75325 713 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 VNN2O95498 520 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 WEE2P0C1S8 567 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 IL9P15248 144 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 EEF1GP26641 437 aaKnown RBP17.95■□□□□ 0.46
CCDC38-203ENST00000546803 KCNJ12Q14500 433 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 ANO6Q4KMQ2 910 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 C4orf50Q6ZRC1 276 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 FUBP3Q96I24 572 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCDC38-203ENST00000546803 TNIP3Q96KP6 325 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 BPIFA3Q9BQP9 254 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 FUCA2Q9BTY2 467 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 DNAI2Q9GZS0 605 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 PRKAG3Q9UGI9 489 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 GTF3C4Q9UKN8 822 aa17.95■□□□□ 0.46
CCDC38-203ENST00000546803 SYCE3A1L190 88 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 MYBPHLA2RUH7 354 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 HCRTO43612 131 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 PTPN1P18031 435 aaKnown RBP17.94■□□□□ 0.46
CCDC38-203ENST00000546803 TRIM21P19474 475 aaKnown RBP17.94■□□□□ 0.46
CCDC38-203ENST00000546803 RAP1GAPP47736 663 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 ALDH1A3P47895 512 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 INCA1Q0VD86 236 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 CFAP221Q4G0U5 840 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 TCP11X2Q5H9J9 407 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 SPATA2LQ8IUW3 424 aaPredicted RBP17.94■□□□□ 0.46
CCDC38-203ENST00000546803 ELMOD1Q8N336 334 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms