RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ARHGAP20Q9P2F6 1191 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 PP2D1A8MPX8 630 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 GOLGA8RI6L899 631 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 CD58P19256 250 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 NFKBIAP25963 317 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 CCND2P30279 289 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 EIF2B2P49770 351 aaKnown RBP13.35□□□□□ -0.27
PTCH1-212ENST00000546744 MECOMQ03112 1051 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 C16orf72Q14CZ0 275 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 EAPPQ56P03 285 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-212ENST00000546744 NET1Q7Z628 596 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-212ENST00000546744 HEXIM2Q96MH2 286 aaKnown RBP13.35□□□□□ -0.27
PTCH1-212ENST00000546744 SH3GL1Q99961 368 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 TUBGCP4Q9UGJ1 667 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 ALS2Q96Q42 1657 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 MUTP22033 750 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 QARSP47897 775 aaKnown RBP13.35□□□□□ -0.27
PTCH1-212ENST00000546744 PPM1FP49593 454 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-212ENST00000546744 CDH6P55285 790 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 CTTNQ14247 550 aaKnown RBP13.35□□□□□ -0.27
PTCH1-212ENST00000546744 ZNF699Q32M78 642 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 USP49Q70CQ1 688 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 SH3TC2Q8TF17 1288 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 CPSF3Q9UKF6 684 aaKnown RBP13.35□□□□□ -0.27
PTCH1-212ENST00000546744 IVNS1ABPQ9Y6Y0 642 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 RGPD2P0DJD1 1756 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 STRCQ7RTU9 1775 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 TNPO2O14787 897 aaKnown RBP13.34□□□□□ -0.27
PTCH1-212ENST00000546744 MAP3K13O43283 966 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 FESP07332 822 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 SLC12A1Q13621 1099 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 ZCCHC7Q8N3Z6 543 aaKnown RBP13.34□□□□□ -0.27
PTCH1-212ENST00000546744 C2orf40Q9H1Z8 148 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 HPS5Q9UPZ3 1129 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 PRR23AA6NEV1 266 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 BTNL10A8MVZ5 291 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 TRIM49D1C9J1S8 452 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 NFIBO00712 420 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 POLBP06746 335 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 USP17L8P0C7I0 530 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 STAT3P40763 770 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 NUDT2P50583 147 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 CHN2P52757 468 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 ANTXR2P58335 489 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 TTMPQ5BVD1 217 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 ARMCX4Q5H9R4 360 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 SLC26A11Q86WA9 606 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 STKLD1Q8NE28 680 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 TMEM120AQ9BXJ8 343 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 PAIP1Q9H074 479 aaKnown RBP13.34□□□□□ -0.27
PTCH1-212ENST00000546744 LRMDAQ9H2I8 198 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 ALG13Q9NP73 1137 aaKnown RBP13.34□□□□□ -0.27
PTCH1-212ENST00000546744 RAB6BQ9NRW1 208 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 PCMTD2Q9NV79 361 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 UBAP1Q9NZ09 502 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 HNRNPCL2B2RXH8 293 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 PYGMP11217 842 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 RAD23AP54725 363 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 ERVK-9P63128 1117 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 PLOD1Q02809 727 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-212ENST00000546744 EPS8Q12929 822 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 CAPRIN1Q14444 709 aaKnown RBP13.34□□□□□ -0.27
PTCH1-212ENST00000546744 CLEC4GQ6UXB4 293 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 SEPT12Q8IYM1 358 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 LRRN4CLQ8ND94 238 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 LENG1Q96BZ8 264 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-212ENST00000546744 DGCR14Q96DF8 476 aaKnown RBP13.34□□□□□ -0.27
PTCH1-212ENST00000546744 VPS50Q96JG6 964 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 RUBCNLQ9H714 662 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 KCNK4Q9NYG8 393 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 DLGAP3O95886 979 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 ALOX5P09917 674 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 TRIM49P0CI25 452 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 TRIM49CP0CI26 452 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 TBL3Q12788 808 aaKnown RBP13.34□□□□□ -0.27
PTCH1-212ENST00000546744 GJC2Q5T442 439 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-212ENST00000546744 PRMT9Q6P2P2 845 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 KIAA0825Q8IV33 1275 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 SRBD1Q8N5C6 995 aaKnown RBP13.34□□□□□ -0.27
PTCH1-212ENST00000546744 FSD1LQ9BXM9 530 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-212ENST00000546744 SH3GLB1Q9Y371 365 aa13.34□□□□□ -0.27
PTCH1-212ENST00000546744 FAM170AA1A519 330 aa13.33□□□□□ -0.28
PTCH1-212ENST00000546744 INO80B-WBP1J3KQ70 363 aa13.33□□□□□ -0.28
PTCH1-212ENST00000546744 CYP26A1O43174 497 aa13.33□□□□□ -0.28
PTCH1-212ENST00000546744 ZC3H11AO75152 810 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTCH1-212ENST00000546744 VIL1P09327 827 aaKnown RBP13.33□□□□□ -0.28
PTCH1-212ENST00000546744 TSHRP16473 764 aa13.33□□□□□ -0.28
PTCH1-212ENST00000546744 DRD4P21917 467 aa13.33□□□□□ -0.28
PTCH1-212ENST00000546744 GUCY1A2P33402 732 aa13.33□□□□□ -0.28
PTCH1-212ENST00000546744 HADHAP40939 763 aa13.33□□□□□ -0.28
PTCH1-212ENST00000546744 ZYXQ15942 572 aaKnown RBP13.33□□□□□ -0.28
PTCH1-212ENST00000546744 HLFQ16534 295 aa13.33□□□□□ -0.28
PTCH1-212ENST00000546744 IMPG1Q17R60 797 aa13.33□□□□□ -0.28
PTCH1-212ENST00000546744 ZBTB49Q6ZSB9 765 aa13.33□□□□□ -0.28
PTCH1-212ENST00000546744 C18orf8Q96DM3 657 aa13.33□□□□□ -0.28
PTCH1-212ENST00000546744 MRPS26Q9BYN8 205 aaKnown RBP13.33□□□□□ -0.28
PTCH1-212ENST00000546744 INO80BQ9C086 356 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-212ENST00000546744 RIC8BQ9NVN3 520 aa13.33□□□□□ -0.28
PTCH1-212ENST00000546744 ABCC6O95255 1503 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms