RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 FETUBQ9UGM5 382 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 ANGPTL2Q9UKU9 493 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 ZBTB21Q9ULJ3 1066 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 SCINQ9Y6U3 715 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 CLUHO75153 1309 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 NFASCO94856 1347 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 TLR3O15455 904 aaKnown RBP14.94□□□□□ -0.02
SRP54-202ENST00000546080 RNF8O76064 485 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 GLRA2P23416 452 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 BPIFB4P59827 614 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 DYNC1I2Q13409 638 aaKnown RBP14.94□□□□□ -0.02
SRP54-202ENST00000546080 MAMLD1Q13495 774 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 LAMB3Q13751 1172 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 FAM98CQ17RN3 349 aaKnown RBP14.94□□□□□ -0.02
SRP54-202ENST00000546080 DOK7Q18PE1 504 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 KLHL38Q2WGJ6 581 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 ADGRD1Q6QNK2 874 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 NLRX1Q86UT6 975 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 PASD1Q8IV76 773 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 ATP11CQ8NB49 1132 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 PYROXD1Q8WU10 500 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 PTPRN2Q92932 1015 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 SGK1O00141 431 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 SMAPO00193 183 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 GH2P01242 217 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 IFNB1P01574 187 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 UBTFL6P0CB48 400 aaPredicted RBP14.94□□□□□ -0.02
SRP54-202ENST00000546080 SSTR1P30872 391 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 PGM1P36871 562 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 AOC3Q16853 763 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 ATP13A4Q4VNC1 1196 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 MFSD7Q6UXD7 560 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 SH3BP5LQ7L8J4 393 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 SESTD1Q86VW0 696 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 CCNJLQ8IV13 435 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 KBTBD2Q8IY47 623 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 BANPQ8N9N5 519 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 HAUS1Q96CS2 278 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 NR1H4Q96RI1 486 aaPredicted RBP14.94□□□□□ -0.02
SRP54-202ENST00000546080 KLF6Q99612 283 aaPredicted RBP14.94□□□□□ -0.02
SRP54-202ENST00000546080 MXRA8Q9BRK3 442 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 RANBP17Q9H2T7 1088 aaKnown RBP14.94□□□□□ -0.02
SRP54-202ENST00000546080 PCDH9Q9HC56 1237 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 KRT82Q9NSB4 513 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 TBX20Q9UMR3 447 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 DRG1Q9Y295 367 aaKnown RBP14.94□□□□□ -0.02
SRP54-202ENST00000546080 WASF2Q9Y6W5 498 aa14.94□□□□□ -0.02
SRP54-202ENST00000546080 ZC3H11AO75152 810 aaKnown RBP eCLIP14.93□□□□□ -0.027e-8■□□□□ 9.3
SRP54-202ENST00000546080 TGDSO95455 350 aa14.93□□□□□ -0.02
SRP54-202ENST00000546080 RARBP10826 455 aa14.93□□□□□ -0.02
SRP54-202ENST00000546080 BRD2P25440 801 aaKnown RBP14.93□□□□□ -0.02
SRP54-202ENST00000546080 DSG3P32926 999 aa14.93□□□□□ -0.02
SRP54-202ENST00000546080 VCPP55072 806 aaKnown RBP14.93□□□□□ -0.02
SRP54-202ENST00000546080 CYP24A1Q07973 514 aa14.93□□□□□ -0.02
SRP54-202ENST00000546080 FAM102BQ5T8I3 360 aa14.93□□□□□ -0.02
SRP54-202ENST00000546080 MFSD14AQ96MC6 490 aa14.93□□□□□ -0.02
SRP54-202ENST00000546080 FAM161BQ96MY7 647 aa14.93□□□□□ -0.02
SRP54-202ENST00000546080 KCNK13Q9HB14 408 aa14.93□□□□□ -0.02
SRP54-202ENST00000546080 FAM198AQ9UFP1 575 aa14.93□□□□□ -0.02
SRP54-202ENST00000546080 MRPL11Q9Y3B7 192 aaKnown RBP14.93□□□□□ -0.02
SRP54-202ENST00000546080 LTBP1Q14766 1721 aa14.93□□□□□ -0.02
SRP54-202ENST00000546080 PPEF1O14829 653 aaPredicted RBP14.92□□□□□ -0.02
SRP54-202ENST00000546080 LPXNO60711 386 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 PIAS1O75925 651 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 SERPINB2P05120 415 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 AMPD1P23109 780 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 QARSP47897 775 aaKnown RBP14.92□□□□□ -0.02
SRP54-202ENST00000546080 ARL4CP56559 192 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 PLCB3Q01970 1234 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 WDR72Q3MJ13 1102 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 TRMT1LQ7Z2T5 733 aaKnown RBP14.92□□□□□ -0.02
SRP54-202ENST00000546080 PCGF5Q86SE9 256 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 MAP4K3Q8IVH8 894 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 ARHGAP18Q8N392 663 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.92□□□□□ -0.02
SRP54-202ENST00000546080 CCDC110Q8TBZ0 833 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 MZB1Q8WU39 189 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 POMGNT1Q8WZA1 660 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 OXNAD1Q96HP4 312 aaPredicted RBP14.92□□□□□ -0.02
SRP54-202ENST00000546080 ZDHHC15Q96MV8 337 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 SENP7Q9BQF6 1050 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 TMEM121Q9BTD3 319 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 DHRS4Q9BTZ2 278 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 IP6K2Q9UHH9 426 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 G3V3G9 751 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 FCHO1O14526 889 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 YWHABP31946 246 aaKnown RBP14.92□□□□□ -0.02
SRP54-202ENST00000546080 RBM5P52756 815 aaKnown RBP eCLIP14.92□□□□□ -0.02
SRP54-202ENST00000546080 NOMO3P69849 1222 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 MCL1Q07820 350 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 OASLQ15646 514 aaKnown RBP14.92□□□□□ -0.02
SRP54-202ENST00000546080 DCAF8Q5TAQ9 597 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 PLEKHA7Q6IQ23 1121 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 TRIM72Q6ZMU5 477 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 C3orf62Q6ZUJ4 267 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 RFX8Q6ZV50 586 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 TTC7BQ86TV6 843 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 FEZF2Q8TBJ5 459 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 KIFC3Q9BVG8 833 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 ACSS3Q9H6R3 686 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms