RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 SENP7Q9BQF6 1050 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 KDM4CQ9H3R0 1056 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 PRDM16Q9HAZ2 1276 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 NOP53Q9NZM5 478 aaKnown RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 UBQLN1Q9UMX0 589 aaKnown RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 MYH1P12882 1939 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 GOLGA8QA0A0J9YX86 632 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 GOLGA8OA6NCC3 632 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 SOWAHDA6NJG2 315 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 GOLGA8NF8WBI6 632 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 GHRP10912 638 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 MBL2P11226 248 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-218ENST00000545889 WEE1P30291 646 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 ADCYAP1R1P41586 468 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 NNTQ13423 1086 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 SLMAPQ14BN4 828 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 TCP11X2Q5H9J9 407 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 BRI3BPQ8WY22 251 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 DEFB118Q96PH6 123 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 OSBPL1AQ9BXW6 950 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 EMILIN2Q9BXX0 1053 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 ZNF214Q9UL59 606 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-218ENST00000545889 SPTLC1O15269 473 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 GAS2O43903 313 aaKnown RBP9.02□□□□□ -0.97
CLIP1-218ENST00000545889 XYLBO75191 536 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 ALDH1A2O94788 518 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 ODC1P11926 461 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 RGS7P49802 495 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 CLCN3P51790 818 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 ZBED6P86452 979 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 FOXD4Q12950 439 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-218ENST00000545889 ZNF484Q5JVG2 852 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 RGL4Q8IZJ4 473 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 TEKT4Q8WW24 435 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 EZH1Q92800 747 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-218ENST00000545889 CAPNS2Q96L46 248 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 MED15Q96RN5 788 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 ACTR5Q9H9F9 607 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-218ENST00000545889 FAM114A2Q9NRY5 505 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-218ENST00000545889 SLC30A1Q9Y6M5 507 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 TEX33O43247 280 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 PPFIA2O75334 1257 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 TRIM49P0CI25 452 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 TRIM49CP0CI26 452 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 RALBP11234 206 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 KLRC1P26715 233 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 PNPLA4P41247 253 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 CTCFP49711 727 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-218ENST00000545889 TRIP13Q15645 432 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-218ENST00000545889 SYTL3Q4VX76 610 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 PID1Q7Z2X4 250 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 ARHGAP22Q7Z5H3 698 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 CYP4F11Q9HBI6 524 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 FAM49BQ9NUQ9 324 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 KANSL3Q9P2N6 904 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 TSR3Q9UJK0 312 aaKnown RBP9.02□□□□□ -0.97
CLIP1-218ENST00000545889 PLA2G4CQ9UP65 541 aa9.02□□□□□ -0.97
CLIP1-218ENST00000545889 A0A0G2JLL6 359 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 PIK3CDO00329 1044 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 ZNF189O75820 626 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 SLITRK3O94933 977 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 KRT7P08729 469 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 CD44P16070 742 aaKnown RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 OCRLQ01968 901 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 LBRQ14739 615 aaKnown RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 FAM133BQ5BKY9 247 aaKnown RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 ZC3H12AQ5D1E8 599 aaKnown RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 GLRA4Q5JXX5 417 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 ZNF280DQ6N043 979 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 PRRT2Q7Z6L0 340 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 GUF1Q8N442 669 aaKnown RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 DNERQ8NFT8 737 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 CSGALNACT1Q8TDX6 532 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 ASAP3Q8TDY4 903 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 CLEC4DQ8WXI8 215 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 STAMBPL1Q96FJ0 436 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 RMDN2Q96LZ7 410 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 POLR3CQ9BUI4 534 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 THAP9Q9H5L6 903 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 TXNRD2Q9NNW7 524 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 ZNF112Q9UJU3 913 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 RP1L1Q8IWN7 2480 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 KDM1AO60341 852 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 PLA2G6O60733 806 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 MT-ND3P03897 115 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 SERPING1P05155 500 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 ZNF286BP0CG31 522 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 TAC1P20366 129 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 EIF4A3P38919 411 aaKnown RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 SLC11A2P49281 568 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 AP1B1Q10567 949 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 KCNH2Q12809 1159 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 IMPG1Q17R60 797 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 NOL9Q5SY16 702 aaKnown RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 ZNF746Q6NUN9 644 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 TAF2Q6P1X5 1199 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 NT5DC4Q86YG4 428 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 COG1Q8WTW3 980 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 ZBTB18Q99592 522 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms