RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ANO5Q75V66 913 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 PHLDB2Q86SQ0 1253 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 NLRX1Q86UT6 975 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 NIPA2Q8N8Q9 360 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 SYTL5Q8TDW5 730 aaPredicted RBP9.22□□□□□ -0.93
TDP1-204ENST00000545686 AGBL1Q96MI9 1066 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 FNBP1Q96RU3 617 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 FAM167BQ9BTA0 163 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 TRIM55Q9BYV6 548 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 NPHS2Q9NP85 383 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 FBXO28Q9NVF7 368 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 ARHGAP28Q9P2N2 729 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 RABGEF1Q9UJ41 708 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 ZMYND8Q9ULU4 1186 aaPredicted RBP9.22□□□□□ -0.93
TDP1-204ENST00000545686 LRRD1A4D1F6 860 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 HAUS5O94927 633 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 CCNE2O96020 404 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 ATF7P17544 494 aaPredicted RBP9.21□□□□□ -0.93
TDP1-204ENST00000545686 ATP4AP20648 1035 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 MMP8P22894 467 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 GLRA2P23416 452 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 CDC25CP30307 473 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 GJC1P36383 396 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 ARL4CP56559 192 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 OCRLQ01968 901 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 PGM5Q15124 567 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 ZRSR2Q15696 482 aaKnown RBP9.21□□□□□ -0.93
TDP1-204ENST00000545686 SEPT7Q16181 437 aaKnown RBP9.21□□□□□ -0.93
TDP1-204ENST00000545686 TDRD10Q5VZ19 366 aaKnown RBP9.21□□□□□ -0.93
TDP1-204ENST00000545686 TRIM68Q6AZZ1 485 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 IRGCQ6NXR0 463 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 XRRA1Q6P2D8 792 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 POLNQ7Z5Q5 900 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 CHSY1Q86X52 802 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 PPIL6Q8IXY8 311 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 ZNF276Q8N554 614 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 SLC35B2Q8TB61 432 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 MZB1Q8WU39 189 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 PTCD3Q96EY7 689 aaKnown RBP9.21□□□□□ -0.93
TDP1-204ENST00000545686 BICD1Q96G01 975 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 SH2D3AQ9BRG2 576 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 BTBD10Q9BSF8 475 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 LRCH1Q9Y2L9 728 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 PCDHB4Q9Y5E5 795 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 STYXL1Q9Y6J8 313 aa9.21□□□□□ -0.93
TDP1-204ENST00000545686 CLUHO75153 1309 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 COL11A1P12107 1806 aaPredicted RBP9.21□□□□□ -0.94
TDP1-204ENST00000545686 A0A1W2PPM1 405 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 NVLO15381 856 aaKnown RBP9.21□□□□□ -0.94
TDP1-204ENST00000545686 DGAT1O75907 488 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 ZSCAN5DPP0CG00 497 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 FGFR1P11362 822 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 KRT10P13645 584 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 CTCFP49711 727 aaPredicted RBP9.21□□□□□ -0.94
TDP1-204ENST00000545686 ZNF132P52740 706 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 GPX6P59796 221 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 PIGHQ14442 188 aaPredicted RBP9.21□□□□□ -0.94
TDP1-204ENST00000545686 KRT72Q14CN4 511 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 MAPK6Q16659 721 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 MUM1Q2TAK8 710 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 WDR72Q3MJ13 1102 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 C2CD6Q53TS8 623 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 KAZNQ674X7 775 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 TMEM270Q6UE05 265 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 MTDHQ86UE4 582 aaKnown RBP9.21□□□□□ -0.94
TDP1-204ENST00000545686 BANPQ8N9N5 519 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 TTC13Q8NBP0 860 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 ATP6V0A1Q93050 837 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 ZNF333Q96JL9 665 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 MIPEPQ99797 713 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 SH3GL3Q99963 347 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 PDLIM7Q9NR12 457 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 POLIQ9UNA4 740 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 MTO1Q9Y2Z2 717 aaKnown RBP9.21□□□□□ -0.94
TDP1-204ENST00000545686 PCDHA10Q9Y5I2 948 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 SNCAIPQ9Y6H5 919 aa9.21□□□□□ -0.94
TDP1-204ENST00000545686 TCRBV5S1A1TA0A578 114 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 PI4K2BG5E9Z4 385 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 SGK1O00141 431 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 ENTPD5O75356 428 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 VNN1O95497 513 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 PIGRP01833 764 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 DHRS4L1P0CG22 281 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 NEFHP12036 1026 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 TNNI1P19237 187 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 ADRA1DP25100 572 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 CDKN2BP42772 138 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 LIG4P49917 911 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 PASD1Q8IV76 773 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 CEP120Q8N960 986 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 TTC8Q8TAM2 541 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 PYROXD1Q8WU10 500 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 SKA1Q96BD8 255 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 ELMO3Q96BJ8 720 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 FAM136AQ96C01 138 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 CEP170P1Q96L14 293 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 PAFAH2Q99487 392 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 CADM1Q9BY67 442 aaKnown RBP9.2□□□□□ -0.94
TDP1-204ENST00000545686 VCXQ9H320 206 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 KLHL11Q9NVR0 708 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms