RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 ZFHX2Q9C0A1 2572 aaPredicted RBP21.39■■□□□ 1.01
CHD4-213ENST00000545584 HEPACAM2A8MVW5 462 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 MAN2B1O00754 1011 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 ZNF263O14978 683 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 TNNC2P02585 160 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 GLULP15104 373 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 MYO1EQ12965 1108 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 NFE2Q16621 373 aaPredicted RBP21.39■■□□□ 1.01
CHD4-213ENST00000545584 ZC3H14Q6PJT7 736 aaKnown RBP21.39■■□□□ 1.01
CHD4-213ENST00000545584 UNC13DQ70J99 1090 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 ASCL5Q7RTU5 278 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 LRRTM3Q86VH5 581 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 PDCL2Q8N4E4 241 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 ZNF507Q8TCN5 953 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 LPIN3Q9BQK8 851 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 MTMR12Q9C0I1 747 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 SEMA4AQ9H3S1 761 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 ZNF334Q9HCZ1 680 aaPredicted RBP21.39■■□□□ 1.01
CHD4-213ENST00000545584 TRPV5Q9NQA5 729 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 SPATA6Q9NWH7 488 aaPredicted RBP21.39■■□□□ 1.01
CHD4-213ENST00000545584 HSPBP1Q9NZL4 362 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 MTF2Q9Y483 593 aaPredicted RBP21.39■■□□□ 1.01
CHD4-213ENST00000545584 GTF3C3Q9Y5Q9 886 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 SNX9Q9Y5X1 595 aa21.39■■□□□ 1.01
CHD4-213ENST00000545584 UBE4BO95155 1302 aa21.38■■□□□ 1.01
CHD4-213ENST00000545584 DPYSL4O14531 572 aa21.38■■□□□ 1.01
CHD4-213ENST00000545584 HAPLN1P10915 354 aaPredicted RBP21.38■■□□□ 1.01
CHD4-213ENST00000545584 CDC25CP30307 473 aa21.38■■□□□ 1.01
CHD4-213ENST00000545584 CDR1P51861 262 aa21.38■■□□□ 1.01
CHD4-213ENST00000545584 GPR158Q5T848 1215 aa21.38■■□□□ 1.01
CHD4-213ENST00000545584 GAREM2Q75VX8 874 aa21.38■■□□□ 1.01
CHD4-213ENST00000545584 SPATA18Q8TC71 538 aa21.38■■□□□ 1.01
CHD4-213ENST00000545584 ACBD6Q9BR61 282 aa21.38■■□□□ 1.01
CHD4-213ENST00000545584 INTS13Q9NVM9 706 aa21.38■■□□□ 1.01
CHD4-213ENST00000545584 GDAP2Q9NXN4 497 aa21.38■■□□□ 1.01
CHD4-213ENST00000545584 DDX43Q9NXZ2 648 aaKnown RBP21.38■■□□□ 1.01
CHD4-213ENST00000545584 L1RE1Q9UN81 338 aa21.38■■□□□ 1.01
CHD4-213ENST00000545584 LAMTOR5O43504 91 aa21.37■■□□□ 1.01
CHD4-213ENST00000545584 ATF6P18850 670 aa21.37■■□□□ 1.01
CHD4-213ENST00000545584 TARSP26639 723 aaKnown RBP21.37■■□□□ 1.01
CHD4-213ENST00000545584 SNRPFP62306 86 aaKnown RBP21.37■■□□□ 1.01
CHD4-213ENST00000545584 DNM1Q05193 864 aaKnown RBP21.37■■□□□ 1.01
CHD4-213ENST00000545584 DUOXA2Q1HG44 320 aa21.37■■□□□ 1.01
CHD4-213ENST00000545584 RESP18Q5W5W9 173 aa21.37■■□□□ 1.01
CHD4-213ENST00000545584 EPM2AIP1Q7L775 607 aaPredicted RBP21.37■■□□□ 1.01
CHD4-213ENST00000545584 HS2ST1Q7LGA3 356 aa21.37■■□□□ 1.01
CHD4-213ENST00000545584 CBWD2Q8IUF1 395 aa21.37■■□□□ 1.01
CHD4-213ENST00000545584 ARID3BQ8IVW6 561 aaPredicted RBP21.37■■□□□ 1.01
CHD4-213ENST00000545584 CEP57L1Q8IYX8 460 aa21.37■■□□□ 1.01
CHD4-213ENST00000545584 TOP6BLQ8N6T0 577 aa21.37■■□□□ 1.01
CHD4-213ENST00000545584 CSGALNACT1Q8TDX6 532 aa21.37■■□□□ 1.01
CHD4-213ENST00000545584 GIPC2Q8TF65 315 aa21.37■■□□□ 1.01
CHD4-213ENST00000545584 BLZF1Q9H2G9 400 aa21.37■■□□□ 1.01
CHD4-213ENST00000545584 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.36■■□□□ 1.01
CHD4-213ENST00000545584 PVALEFA0A1B0GWK0 134 aa21.36■■□□□ 1.01
CHD4-213ENST00000545584 PRPF40AO75400 957 aaKnown RBP21.36■■□□□ 1.01
CHD4-213ENST00000545584 SP9P0CG40 484 aa21.36■■□□□ 1.01
CHD4-213ENST00000545584 HOXD13P35453 343 aa21.36■■□□□ 1.01
CHD4-213ENST00000545584 AFMP43652 599 aa21.36■■□□□ 1.01
CHD4-213ENST00000545584 LHX1P48742 406 aa21.36■■□□□ 1.01
CHD4-213ENST00000545584 PKP1Q13835 747 aa21.36■■□□□ 1.01
CHD4-213ENST00000545584 STXBP5Q5T5C0 1151 aa21.36■■□□□ 1.01
CHD4-213ENST00000545584 LMBRD2Q68DH5 695 aaPredicted RBP21.36■■□□□ 1.01
CHD4-213ENST00000545584 LEO1Q8WVC0 666 aaPredicted RBP21.36■■□□□ 1.01
CHD4-213ENST00000545584 TASP1Q9H6P5 420 aa21.36■■□□□ 1.01
CHD4-213ENST00000545584 SIX4Q9UIU6 781 aa21.36■■□□□ 1.01
CHD4-213ENST00000545584 ZMYM5Q9UJ78 669 aa21.36■■□□□ 1.01
CHD4-213ENST00000545584 COL4A3Q01955 1670 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 CHADO15335 359 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 PCSK1P29120 753 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 INTS6LQ5JSJ4 861 aaKnown RBP21.35■■□□□ 1.01
CHD4-213ENST00000545584 DPH6Q7L8W6 267 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 WDR49Q8IV35 697 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 NELFCDQ8IXH7 590 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 ADGRF2Q8IZF7 708 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 RDH13Q8NBN7 331 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 OR5B17Q8NGF7 314 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 CXorf38Q8TB03 319 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 FAM3CQ92520 227 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 CLDN23Q96B33 292 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 HPDLQ96IR7 371 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 FAM84AQ96KN4 292 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 FNBP1Q96RU3 617 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 PI4K2AQ9BTU6 479 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 AGPAT3Q9NRZ7 376 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 OBP2AQ9NY56 170 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 RCOR1Q9UKL0 485 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 NDRG2Q9UN36 371 aaKnown RBP21.35■■□□□ 1.01
CHD4-213ENST00000545584 PIAS3Q9Y6X2 628 aa21.35■■□□□ 1.01
CHD4-213ENST00000545584 TGFB1I1O43294 461 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 ACAT1P24752 427 aaKnown RBP21.34■■□□□ 1.01
CHD4-213ENST00000545584 CASP1P29466 404 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 RPS9P46781 194 aaKnown RBP21.34■■□□□ 1.01
CHD4-213ENST00000545584 RPL10AP62906 217 aaKnown RBP21.34■■□□□ 1.01
CHD4-213ENST00000545584 CYP4F8P98187 520 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 EHHADHQ08426 723 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 SNRNP35Q16560 246 aaKnown RBP21.34■■□□□ 1.01
CHD4-213ENST00000545584 C1orf228Q6PIY5 440 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 GPIHBP1Q8IV16 184 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 XXYLT1Q8NBI6 393 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms