RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ARNTLO00327 626 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 KIAA0391O15091 583 aaKnown RBP22.74■■□□□ 1.23
SCARB1-210ENST00000545493 TMEM191BP0C7N4 346 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 GABRR2P28476 465 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 GDI1P31150 447 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 AMPD3Q01432 767 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 BFSP1Q12934 665 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 RESP18Q5W5W9 173 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 UNC13DQ70J99 1090 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 ITIH5Q86UX2 942 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 OSTM1Q86WC4 334 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 SPRYD3Q8NCJ5 442 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 OR5B17Q8NGF7 314 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 GPR88Q9GZN0 384 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 BLZF1Q9H2G9 400 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 IL21Q9HBE4 155 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 UBE4BO95155 1302 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 FAM170BA6NMN3 283 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 TGFB1I1O43294 461 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 HCRTO43612 131 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 HAPLN1P10915 354 aaPredicted RBP22.73■■□□□ 1.23
SCARB1-210ENST00000545493 PDIA4P13667 645 aaKnown RBP22.73■■□□□ 1.23
SCARB1-210ENST00000545493 TUFMP49411 452 aaKnown RBP22.73■■□□□ 1.23
SCARB1-210ENST00000545493 CYP4F8P98187 520 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 DNM1Q05193 864 aaKnown RBP22.73■■□□□ 1.23
SCARB1-210ENST00000545493 CCDC142Q17RM4 750 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 MFSD6LQ8IWD5 586 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 ZNF687Q8N1G0 1237 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 CSGALNACT2Q8N6G5 542 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 ZNF507Q8TCN5 953 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 CACTINQ8WUQ7 758 aaKnown RBP22.73■■□□□ 1.23
SCARB1-210ENST00000545493 SCFD1Q8WVM8 642 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 PKMYT1Q99640 499 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 BCO2Q9BYV7 579 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 ATXN3LQ9H3M9 355 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 AGPAT3Q9NRZ7 376 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 INTS13Q9NVM9 706 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 R4GN57 208 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 CACNA1IQ9P0X4 2223 aa22.73■■□□□ 1.23
SCARB1-210ENST00000545493 DENND4CQ5VZ89 1909 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 DCHS1Q96JQ0 3298 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 KRT19P08727 400 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 SP9P0CG40 484 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 ME1P48163 572 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 GPR15P49685 360 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 SMARCB1Q12824 385 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 DCP1BQ8IZD4 617 aaKnown RBP22.72■■□□□ 1.23
SCARB1-210ENST00000545493 STKLD1Q8NE28 680 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 FAM200AQ8TCP9 573 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 GIPC2Q8TF65 315 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 LEO1Q8WVC0 666 aaPredicted RBP22.72■■□□□ 1.23
SCARB1-210ENST00000545493 IRF7Q92985 503 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 TRPV5Q9NQA5 729 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 GDAP2Q9NXN4 497 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 DDX43Q9NXZ2 648 aaKnown RBP22.72■■□□□ 1.23
SCARB1-210ENST00000545493 SNX9Q9Y5X1 595 aa22.72■■□□□ 1.23
SCARB1-210ENST00000545493 WDR87Q6ZQQ6 2873 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 PRAMEF12O95522 483 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 FGF19O95750 216 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 ACAT1P24752 427 aaKnown RBP22.71■■□□□ 1.23
SCARB1-210ENST00000545493 RBP5P82980 135 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 TSPY1Q01534 308 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 FCHO2Q0JRZ9 810 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 FZD5Q13467 585 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 CUL4BQ13620 913 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 VEPH1Q14D04 833 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 INTS6LQ5JSJ4 861 aaKnown RBP22.71■■□□□ 1.23
SCARB1-210ENST00000545493 GPR158Q5T848 1215 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 ZNF852Q6ZMS4 543 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 NELFCDQ8IXH7 590 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 GRAMD1CQ8IYS0 662 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 CLDN23Q96B33 292 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 ANKRD36BP1Q96IX9 119 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 FAM13BQ9NYF5 915 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 PCDHB5Q9Y5E4 795 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 PIAS3Q9Y6X2 628 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 DNAH14Q0VDD8 3507 aa22.71■■□□□ 1.23
SCARB1-210ENST00000545493 ZNF233A6NK53 670 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 HUS1O60921 280 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 MAGEA9P43362 315 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 BMT2Q1RMZ1 405 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 ATL3Q6DD88 541 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 GPIHBP1Q8IV16 184 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 WDR49Q8IV35 697 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 ARID3BQ8IVW6 561 aaPredicted RBP22.7■■□□□ 1.22
SCARB1-210ENST00000545493 ADGRF2Q8IZF7 708 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 TMEM86AQ8N2M4 240 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 TOP6BLQ8N6T0 577 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 LRRC3BQ96PB8 259 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 ACBD6Q9BR61 282 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 PI4K2AQ9BTU6 479 aa22.7■■□□□ 1.22
SCARB1-210ENST00000545493 SPATA6Q9NWH7 488 aaPredicted RBP22.7■■□□□ 1.22
SCARB1-210ENST00000545493 FAM186AA6NE01 2351 aa22.69■■□□□ 1.22
SCARB1-210ENST00000545493 F5P12259 2224 aa22.69■■□□□ 1.22
SCARB1-210ENST00000545493 ZNF263O14978 683 aa22.69■■□□□ 1.22
SCARB1-210ENST00000545493 HMGA1P17096 107 aaKnown RBP22.69■■□□□ 1.22
SCARB1-210ENST00000545493 CDC25CP30307 473 aa22.69■■□□□ 1.22
SCARB1-210ENST00000545493 MYL7Q01449 175 aa22.69■■□□□ 1.22
SCARB1-210ENST00000545493 SNRNP35Q16560 246 aaKnown RBP22.69■■□□□ 1.22
SCARB1-210ENST00000545493 ARHGAP15Q53QZ3 475 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms