RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SIM1P81133 766 aaPredicted RBP10.22□□□□□ -0.77
CHD4-212ENST00000545083 MYBPC2Q14324 1141 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 OVOS1Q6IE37 1185 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 MPZL3Q6UWV2 235 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 USP37Q86T82 979 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 ITIH5Q86UX2 942 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 PROSER1Q86XN7 944 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 GIPC2Q8TF65 315 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 P2RY13Q9BPV8 354 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 OXCT2Q9BYC2 517 aaPredicted RBP10.22□□□□□ -0.77
CHD4-212ENST00000545083 HAPLN2Q9GZV7 340 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 BHMT2Q9H2M3 363 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 TMEM134Q9H6X4 195 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 ARHGAP28Q9P2N2 729 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 GPSM3Q9Y4H4 160 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 CITO14578 2027 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 PFKFB2O60825 505 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 CXCL8P10145 99 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 TYMPP19971 482 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 MCM7P33993 719 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 MAPK8P45983 427 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 DHPSP49366 369 aaPredicted RBP10.21□□□□□ -0.77
CHD4-212ENST00000545083 FOSBP53539 338 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 FAM193AP78312 1265 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 MAPK7Q13164 816 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 PSMD2Q13200 908 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 ZBTB6Q15916 424 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 FBXO43Q4G163 708 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 TXNDC8Q6A555 127 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 ANO7Q6IWH7 933 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 DSTYKQ6XUX3 929 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 PIP4P1Q86T03 277 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 PDZD3Q86UT5 571 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 RASSF3Q86WH2 238 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 DIS3L2Q8IYB7 885 aaKnown RBP10.21□□□□□ -0.77
CHD4-212ENST00000545083 CHCHD4Q8N4Q1 142 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 MAB21L3Q8N8X9 362 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 STKLD1Q8NE28 680 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 TSTD1Q8NFU3 115 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 PIGKQ92643 395 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 ACDQ96AP0 544 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 KIF12Q96FN5 646 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 BBC3Q96PG8 261 aaPredicted RBP10.21□□□□□ -0.77
CHD4-212ENST00000545083 SEPT5Q99719 369 aaPredicted RBP10.21□□□□□ -0.77
CHD4-212ENST00000545083 BRMS1Q9HCU9 246 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 PDRG1Q9NUG6 133 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 TMEM74BQ9NUR3 256 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 ANKFY1Q9P2R3 1169 aa10.21□□□□□ -0.77
CHD4-212ENST00000545083 ADAMTS20P59510 1910 aa10.21□□□□□ -0.78
CHD4-212ENST00000545083 THADAQ6YHU6 1953 aa10.21□□□□□ -0.78
CHD4-212ENST00000545083 ACACAQ13085 2346 aa10.21□□□□□ -0.78
CHD4-212ENST00000545083 TTC26A0AVF1 554 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 FAM221BA6H8Z2 402 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 SLC16A4O15374 487 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 F11P03951 625 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 HNRNPLP14866 589 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHD4-212ENST00000545083 HMGA1P17096 107 aaKnown RBP10.2□□□□□ -0.78
CHD4-212ENST00000545083 AVPR1AP37288 418 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 TNFSF9P41273 254 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 NLRP12P59046 1061 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 BFSP1Q12934 665 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 SEMA3BQ13214 749 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 NOLC1Q14978 699 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHD4-212ENST00000545083 COL28A1Q2UY09 1125 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 MGAT5BQ3V5L5 792 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 SLC39A12Q504Y0 691 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 USP39Q53GS9 565 aaKnown RBP10.2□□□□□ -0.78
CHD4-212ENST00000545083 TRIM61Q5EBN2 209 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 ARMCX5Q6P1M9 558 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 FRMD1Q8N878 549 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 MDGA1Q8NFP4 955 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 ERMNQ8TAM6 284 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 CD101Q93033 1021 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 SENP8Q96LD8 212 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 GCNAQ96QF7 691 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 RUSC1Q9BVN2 902 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 TM6SF1Q9BZW5 370 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 SLC32A1Q9H598 525 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 ECT2Q9H8V3 914 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 KMT5AQ9NQR1 393 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 FSCN3Q9NQT6 498 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 TDP1Q9NUW8 608 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 HSFX1Q9UBD0 423 aa10.2□□□□□ -0.78
CHD4-212ENST00000545083 EVLQ9UI08 416 aaPredicted RBP10.2□□□□□ -0.78
CHD4-212ENST00000545083 ASXL3Q9C0F0 2248 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 MAST4O15021 2626 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 SFI1A8K8P3 1242 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 LACTBL1A8MY62 500 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 HIP1RO75146 1068 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 TOM1L1O75674 476 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 ENGP17813 658 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 CYP3A5P20815 502 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 CCT6AP40227 531 aaKnown RBP10.19□□□□□ -0.78
CHD4-212ENST00000545083 PTGER3P43115 390 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 TUFMP49411 452 aaKnown RBP10.19□□□□□ -0.78
CHD4-212ENST00000545083 GPR15P49685 360 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 LILRA4P59901 499 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 AMPD2Q01433 879 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 MCL1Q07820 350 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 DMP1Q13316 513 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms