RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 INTS8Q75QN2 995 aaKnown RBP16.86■□□□□ 0.29
CCDC78-216ENST00000544996 LRRTM3Q86VH5 581 aa16.86■□□□□ 0.29
CCDC78-216ENST00000544996 NPAS3Q8IXF0 933 aa16.86■□□□□ 0.29
CCDC78-216ENST00000544996 FAM200AQ8TCP9 573 aa16.86■□□□□ 0.29
CCDC78-216ENST00000544996 ING5Q8WYH8 240 aa16.86■□□□□ 0.29
CCDC78-216ENST00000544996 ERCC4Q92889 916 aaPredicted RBP16.86■□□□□ 0.29
CCDC78-216ENST00000544996 PBXIP1Q96AQ6 731 aa16.86■□□□□ 0.29
CCDC78-216ENST00000544996 TSG101Q99816 390 aa16.86■□□□□ 0.29
CCDC78-216ENST00000544996 ABI2Q9NYB9 513 aaPredicted RBP16.86■□□□□ 0.29
CCDC78-216ENST00000544996 ANHXE9PGG2 379 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 AKAP3O75969 853 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 STAU1O95793 577 aaKnown RBP16.85■□□□□ 0.29
CCDC78-216ENST00000544996 FAM163BP0C2L3 166 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 MYL4P12829 197 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 ACAT1P24752 427 aaKnown RBP16.85■□□□□ 0.29
CCDC78-216ENST00000544996 PRCPP42785 496 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 VAMP7P51809 220 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 MYL6P60660 151 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 UBE2HP62256 183 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 STIM1Q13586 685 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 HTR4Q13639 388 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 TAF12Q16514 161 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 SLC5A9Q2M3M2 681 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 COBLL1Q53SF7 1204 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 INTS6LQ5JSJ4 861 aaKnown RBP16.85■□□□□ 0.29
CCDC78-216ENST00000544996 TDRD10Q5VZ19 366 aaKnown RBP16.85■□□□□ 0.29
CCDC78-216ENST00000544996 HFE2Q6ZVN8 426 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 LIMS2Q7Z4I7 341 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 BMP8AQ7Z5Y6 402 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 FAM186BQ8IYM0 893 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 SLC44A3Q8N4M1 653 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 PLEKHO2Q8TD55 490 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 RSAD2Q8WXG1 361 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 SNX25Q9H3E2 840 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 NXF1Q9UBU9 619 aaKnown RBP16.85■□□□□ 0.29
CCDC78-216ENST00000544996 DUSP12Q9UNI6 340 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 NUMBLQ9Y6R0 609 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 SCN1AP35498 2009 aa16.85■□□□□ 0.29
CCDC78-216ENST00000544996 CETN3O15182 167 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 TACC1O75410 805 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 SOAT2O75908 522 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 FGF19O95750 216 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 C4BPAP04003 597 aaKnown RBP16.84■□□□□ 0.29
CCDC78-216ENST00000544996 COL9A1P20849 921 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 WARSP23381 471 aaKnown RBP16.84■□□□□ 0.29
CCDC78-216ENST00000544996 PPP1R2P41236 205 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 CDR1P51861 262 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 EPHA5P54756 1037 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 DLG4P78352 724 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 ENPEPQ07075 957 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 NCOA4Q13772 614 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 ZNF699Q32M78 642 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 ZCWPW2Q504Y3 356 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 PRSS36Q5K4E3 855 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 PARM1Q6UWI2 310 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 DNAJB7Q7Z6W7 309 aaPredicted RBP16.84■□□□□ 0.29
CCDC78-216ENST00000544996 OSTM1Q86WC4 334 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 SPATA2LQ8IUW3 424 aaPredicted RBP16.84■□□□□ 0.29
CCDC78-216ENST00000544996 SUGP1Q8IWZ8 645 aaKnown RBP16.84■□□□□ 0.29
CCDC78-216ENST00000544996 HS6ST3Q8IZP7 471 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 TTC9BQ8N6N2 239 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 PSMG2Q969U7 264 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 MCRS1Q96EZ8 462 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 DNAJC25Q9H1X3 360 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 SMOC2Q9H3U7 446 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 ABCB6Q9NP58 842 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 GTF3C4Q9UKN8 822 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 CDH9Q9ULB4 789 aa16.84■□□□□ 0.29
CCDC78-216ENST00000544996 HAPLN1P10915 354 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-216ENST00000544996 EPB41P11171 864 aaKnown RBP16.83■□□□□ 0.28
CCDC78-216ENST00000544996 P4HA1P13674 534 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 CEBPBP17676 345 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 GNL1P36915 607 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-216ENST00000544996 MAPRE1Q15691 268 aaKnown RBP16.83■□□□□ 0.28
CCDC78-216ENST00000544996 SGSM1Q2NKQ1 1148 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 ZNF667Q5HYK9 610 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 OR6B3Q8NGW1 331 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 KBTBD7Q8WVZ9 684 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 TAF4BQ92750 862 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 FGF14Q92915 247 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 TCEAL4Q96EI5 215 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 ASIC4Q96FT7 647 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 SYT15Q9BQS2 421 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 MKNK1Q9BUB5 465 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 GPR88Q9GZN0 384 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 XYLT2Q9H1B5 865 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 VRTNQ9H8Y1 702 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 TMLHEQ9NVH6 421 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 FBXL21Q9UKT6 434 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 HCN4Q9Y3Q4 1203 aa16.83■□□□□ 0.28
CCDC78-216ENST00000544996 PSMA7O14818 248 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 PDGFRBP09619 1106 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 SRFP11831 508 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 LMO2P25791 158 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 CCR2P41597 374 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 RPL10AP62906 217 aaKnown RBP16.82■□□□□ 0.28
CCDC78-216ENST00000544996 FKBP3Q00688 224 aaKnown RBP16.82■□□□□ 0.28
CCDC78-216ENST00000544996 LRRC63Q05C16 580 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 ZACNQ401N2 412 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 ISM2Q6H9L7 571 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms