RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 GEMIN4P57678 1058 aaKnown RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 C1QBPQ07021 282 aaKnown RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 SEZ6Q53EL9 994 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 MPZL3Q6UWV2 235 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 ARMCX2Q7L311 632 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 FASTKD5Q7L8L6 764 aaKnown RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 CRLF3Q8IUI8 442 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 TEX9Q8N6V9 391 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 FAM149B1Q96BN6 582 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 GLIS2Q9BZE0 524 aaPredicted RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 YIPF3Q9GZM5 350 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 LRRC4Q9HBW1 653 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 SIX2Q9NPC8 291 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 IRAK4Q9NWZ3 460 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 GGT7Q9UJ14 662 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 PPP2R3BQ9Y5P8 575 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 NFASCO94856 1347 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 ATXN2Q99700 1313 aaKnown RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 WNK3Q9BYP7 1800 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 KCNN4O15554 427 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 SHOX2O60902 331 aaPredicted RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 HAUS5O94927 633 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 GHRP10912 638 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 ESRRAP11474 423 aaPredicted RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 PTGER2P43116 358 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 SCTRP47872 440 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 SLC12A2P55011 1212 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 PHEXP78562 749 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 RBP5P82980 135 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 UGCGQ16739 394 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 C2CD6Q53TS8 623 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 TFDP3Q5H9I0 405 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 EFCAB12Q6NXP0 572 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 ZC3H3Q8IXZ2 948 aaKnown RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 IL31RAQ8NI17 732 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 AKT1S1Q96B36 256 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 ELMO3Q96BJ8 720 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 ACSF2Q96CM8 615 aaPredicted RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 DLEC1Q9Y238 1755 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 CCDC195A0A1B0GUA6 201 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 SPECC1L-ADORA2AF8WAN1 911 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 PIK3R2O00459 728 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 TRAPPC3O43617 180 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 CRCPO75575 148 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 LYPLA2O95372 231 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 ADORA2BP29275 332 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 SERPINB6P35237 376 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 RANBP1P43487 201 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 BCAR1P56945 870 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 FMO1Q01740 532 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 MCL1Q07820 350 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 ZC3H18Q86VM9 953 aaKnown RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 TMEM161BQ8NDZ6 487 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 PRPF31Q8WWY3 499 aaKnown RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 ART4Q93070 314 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 CENPTQ96BT3 561 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 PGM2Q96G03 612 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 AP5M1Q9H0R1 490 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 SEMA4AQ9H3S1 761 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 RSAD1Q9HA92 442 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 UBN1Q9NPG3 1134 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 AGAP1Q9UPQ3 857 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 MYO5AQ9Y4I1 1855 aaKnown RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 NHSQ6T4R5 1651 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 BAZ2BQ9UIF8 2168 aaKnown RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 ATRNL1Q5VV63 1379 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 IRS2Q9Y4H2 1338 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 OGTO15294 1046 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 MYL3P08590 195 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 ARFIP2P53365 341 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 TMPRSS15P98073 1019 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 MORF4L2Q15014 288 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 SMTNL2Q2TAL5 461 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 GOLGA7BQ2TAP0 167 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 DUPD1Q68J44 220 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 HEATR6Q6AI08 1181 aaKnown RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 METTL23Q86XA0 190 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 C4orf33Q8N1A6 199 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 PDCD7Q8N8D1 485 aaKnown RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 CCT6BQ92526 530 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 KRT35Q92764 455 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 VCPIP1Q96JH7 1222 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 CYTH2Q99418 400 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 FAM49AQ9H0Q0 323 aaPredicted RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 PRMT7Q9NVM4 692 aaPredicted RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 NOD1Q9Y239 953 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 NRAPQ86VF7 1730 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 KIAA1551Q9HCM1 1747 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 RREB1Q92766 1687 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 AGPSO00116 658 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 HBP1O60381 514 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 SHBGP04278 402 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 RAP1GAPP47736 663 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 CTCFP49711 727 aaPredicted RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 ARL13BQ3SXY8 428 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 NBPF12Q5TAG4 269 aaPredicted RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 SLC30A9Q6PML9 568 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 PPM1NQ8N819 430 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 SLC16A10Q8TF71 515 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms