RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 FAM47DPA6NHR8 397 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 SYCE1LA8MT33 242 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 AKAP3O75969 853 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 SERPIND1P05546 499 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 MROH9Q5TGP6 573 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 SLC13A5Q86YT5 568 aaPredicted RBP13.38□□□□□ -0.27
CHD4-211ENST00000544484 SCFD1Q8WVM8 642 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 EML4Q9HC35 981 aaKnown RBP13.38□□□□□ -0.27
CHD4-211ENST00000544484 PXDNQ92626 1479 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 ERO1BQ86YB8 467 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 MFN1Q8IWA4 741 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 DTX3LQ8TDB6 740 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 ZNF669Q96BR6 464 aaPredicted RBP13.37□□□□□ -0.27
CHD4-211ENST00000544484 UBQLN1Q9UMX0 589 aaKnown RBP13.37□□□□□ -0.27
CHD4-211ENST00000544484 BAZ2BQ9UIF8 2168 aaKnown RBP13.37□□□□□ -0.27
CHD4-211ENST00000544484 ST8SIA6P61647 398 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 TAS1R2Q8TE23 839 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 RUBCNQ92622 972 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 PXMP2Q9NR77 195 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 SEC24CP53992 1094 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 C6orf10Q5SRN2 563 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 ZNF263O14978 683 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 PMPCBO75439 489 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 SHMT1P34896 483 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 SYTL5Q8TDW5 730 aaPredicted RBP13.37□□□□□ -0.27
CHD4-211ENST00000544484 TMA16Q96EY4 203 aaKnown RBP13.37□□□□□ -0.27
CHD4-211ENST00000544484 ISCUQ9H1K1 167 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 RIOX1Q9H6W3 641 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 PCDHGB4Q9UN71 923 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 FRMPD1Q5SYB0 1578 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 FOXP2O15409 715 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 NAMPTP43490 491 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 LRIG3Q6UXM1 1119 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 NUP93Q8N1F7 819 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.37□□□□□ -0.272e-6■■■■■ 53.5
CHD4-211ENST00000544484 PDCD2LQ9BRP1 358 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 CATSPERBQ9H7T0 1116 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 VIPAS39Q9H9C1 493 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 GPATCH2LQ9NWQ4 482 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 SH3BP1Q9Y3L3 701 aa13.37□□□□□ -0.27
CHD4-211ENST00000544484 AP1G2O75843 785 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 POLBP06746 335 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 MCF2P10911 925 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 ENO3P13929 434 aaPredicted RBP13.36□□□□□ -0.27
CHD4-211ENST00000544484 CYP11B1P15538 503 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 GTF2A2P52657 109 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 TBCCQ15814 346 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 HASPINQ8TF76 798 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 LZICQ8WZA0 190 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 XPO6Q96QU8 1125 aaKnown RBP13.36□□□□□ -0.27
CHD4-211ENST00000544484 ASPSCR1Q9BZE9 553 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 RUBCNLQ9H714 662 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 MRPL40Q9NQ50 206 aaKnown RBP13.36□□□□□ -0.27
CHD4-211ENST00000544484 HIST1H2AGP0C0S8 130 aaPredicted RBP13.36□□□□□ -0.27
CHD4-211ENST00000544484 HIST1H2ADP20671 130 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 PMS1P54277 932 aaKnown RBP13.36□□□□□ -0.27
CHD4-211ENST00000544484 UGP2Q16851 508 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 ZNF720Q7Z2F6 126 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 PARP9Q8IXQ6 854 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 HIST1H2AHQ96KK5 128 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 HIST1H2AJQ99878 128 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 ZSWIM1Q9BR11 485 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 H2AFJQ9BTM1 129 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 KCNQ5Q9NR82 932 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 KIF17Q9P2E2 1029 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 NCOA3Q9Y6Q9 1424 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 WTIPA6NIX2 430 aaPredicted RBP13.36□□□□□ -0.27
CHD4-211ENST00000544484 MOXD1Q6UVY6 613 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 ADCK2Q7Z695 626 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 IFNEQ86WN2 208 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 MDM1Q8TC05 714 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 SLITRK1Q96PX8 696 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 CENPKQ9BS16 269 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 USP20Q9Y2K6 914 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 PCDHB7Q9Y5E2 793 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 IL1R1P14778 569 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 PTGER2P43116 358 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 HIC1Q14526 733 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 SYTL3Q4VX76 610 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 LVRNQ6Q4G3 990 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 MIB1Q86YT6 1006 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 STKLD1Q8NE28 680 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 DNAJC7Q99615 494 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 LACRTQ9GZZ8 138 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 GPBP1L1Q9HC44 474 aaPredicted RBP13.36□□□□□ -0.27
CHD4-211ENST00000544484 OSGEPQ9NPF4 335 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 SPATS2LQ9NUQ6 558 aaKnown RBP13.36□□□□□ -0.27
CHD4-211ENST00000544484 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.36□□□□□ -0.273e-7■□□□□ 10.6
CHD4-211ENST00000544484 CPA4Q9UI42 421 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 MEFVO15553 781 aaPredicted RBP13.36□□□□□ -0.27
CHD4-211ENST00000544484 CASP7P55210 303 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 LRRC36Q1X8D7 754 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 MPZL3Q6UWV2 235 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 NYAP1Q6ZVC0 841 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 SGF29Q96ES7 293 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 CEP19Q96LK0 163 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 EHD4Q9H223 541 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 USP32Q8NFA0 1604 aa13.36□□□□□ -0.27
CHD4-211ENST00000544484 ANGPT2O15123 496 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms