RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 LMO2P25791 158 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 PIK3CAP42336 1068 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 ASPAP45381 313 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 TNNC1P63316 161 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 ZP2Q05996 745 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 KLHL40Q2TBA0 621 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 DCAF17Q5H9S7 520 aaPredicted RBP20.48■□□□□ 0.87
DDX55-211ENST00000544429 ZNF667Q5HYK9 610 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 PPM1LQ5SGD2 360 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 ATAT1Q5SQI0 421 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 FAM171BQ6P995 826 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 ADHFE1Q8IWW8 467 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 FBXL13Q8NEE6 735 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 ADAMTS19Q8TE59 1207 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 ELMO3Q96BJ8 720 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 FAXDC2Q96IV6 333 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 MMS19Q96T76 1030 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 MRPL45Q9BRJ2 306 aaKnown RBP20.48■□□□□ 0.87
DDX55-211ENST00000544429 PHF7Q9BWX1 381 aaPredicted RBP20.48■□□□□ 0.87
DDX55-211ENST00000544429 BCO2Q9BYV7 579 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 SDCBP2Q9H190 292 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 POMKQ9H5K3 350 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 TMLHEQ9NVH6 421 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 NXF1Q9UBU9 619 aaKnown RBP20.48■□□□□ 0.87
DDX55-211ENST00000544429 INSL5Q9Y5Q6 135 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 FGFR1OPO95684 399 aaKnown RBP20.47■□□□□ 0.87
DDX55-211ENST00000544429 PCSK1P29120 753 aa20.47■□□□□ 0.87
DDX55-211ENST00000544429 MYL7Q01449 175 aa20.47■□□□□ 0.87
DDX55-211ENST00000544429 SLC39A12Q504Y0 691 aa20.47■□□□□ 0.87
DDX55-211ENST00000544429 INTS6LQ5JSJ4 861 aaKnown RBP20.47■□□□□ 0.87
DDX55-211ENST00000544429 TCERG1LQ5VWI1 586 aa20.47■□□□□ 0.87
DDX55-211ENST00000544429 SPOPLQ6IQ16 392 aa20.47■□□□□ 0.87
DDX55-211ENST00000544429 C2orf15Q8WU43 125 aaKnown RBP20.47■□□□□ 0.87
DDX55-211ENST00000544429 PGLYRP2Q96PD5 576 aa20.47■□□□□ 0.87
DDX55-211ENST00000544429 PI4K2AQ9BTU6 479 aa20.47■□□□□ 0.87
DDX55-211ENST00000544429 SMYD3Q9H7B4 428 aa20.47■□□□□ 0.87
DDX55-211ENST00000544429 CYP4F11Q9HBI6 524 aa20.47■□□□□ 0.87
DDX55-211ENST00000544429 RAB20Q9NX57 234 aa20.47■□□□□ 0.87
DDX55-211ENST00000544429 ACAT1P24752 427 aaKnown RBP20.46■□□□□ 0.87
DDX55-211ENST00000544429 ELF1P32519 619 aa20.46■□□□□ 0.87
DDX55-211ENST00000544429 FMO5P49326 533 aa20.46■□□□□ 0.87
DDX55-211ENST00000544429 NOP14P78316 857 aaKnown RBP20.46■□□□□ 0.87
DDX55-211ENST00000544429 DUSP4Q13115 394 aa20.46■□□□□ 0.87
DDX55-211ENST00000544429 CCDC40Q4G0X9 1142 aa20.46■□□□□ 0.87
DDX55-211ENST00000544429 TTC9BQ8N6N2 239 aa20.46■□□□□ 0.87
DDX55-211ENST00000544429 ATAD1Q8NBU5 361 aa20.46■□□□□ 0.87
DDX55-211ENST00000544429 SMG7Q92540 1137 aaKnown RBP20.46■□□□□ 0.87
DDX55-211ENST00000544429 MMRN2Q9H8L6 949 aa20.46■□□□□ 0.87
DDX55-211ENST00000544429 WDR6Q9NNW5 1121 aaKnown RBP20.46■□□□□ 0.87
DDX55-211ENST00000544429 CDH9Q9ULB4 789 aa20.46■□□□□ 0.87
DDX55-211ENST00000544429 SPDYE4A6NLX3 237 aa20.45■□□□□ 0.86
DDX55-211ENST00000544429 LOC730098B7Z3J9 87 aa20.45■□□□□ 0.86
DDX55-211ENST00000544429 PRRG1O14668 218 aa20.45■□□□□ 0.86
DDX55-211ENST00000544429 CCDC192P0DO97 292 aa20.45■□□□□ 0.86
DDX55-211ENST00000544429 CDH8P55286 799 aa20.45■□□□□ 0.86
DDX55-211ENST00000544429 TSPY1Q01534 308 aa20.45■□□□□ 0.86
DDX55-211ENST00000544429 DCP1BQ8IZD4 617 aaKnown RBP20.45■□□□□ 0.86
DDX55-211ENST00000544429 SPPL2BQ8TCT7 592 aa20.45■□□□□ 0.86
DDX55-211ENST00000544429 NECAB3Q96P71 396 aaPredicted RBP20.45■□□□□ 0.86
DDX55-211ENST00000544429 THAP9Q9H5L6 903 aa20.45■□□□□ 0.86
DDX55-211ENST00000544429 ABCB6Q9NP58 842 aa20.45■□□□□ 0.86
DDX55-211ENST00000544429 CRTAC1Q9NQ79 661 aa20.45■□□□□ 0.86
DDX55-211ENST00000544429 YIPF1Q9Y548 306 aa20.45■□□□□ 0.86
DDX55-211ENST00000544429 MYBPHLA2RUH7 354 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 P4HA2O15460 535 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 CCL16O15467 120 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 ATP2C2O75185 946 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 P4HA1P13674 534 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 PTMSP20962 102 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 GNL1P36915 607 aaPredicted RBP20.44■□□□□ 0.86
DDX55-211ENST00000544429 INCA1Q0VD86 236 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 NFE2Q16621 373 aaPredicted RBP20.44■□□□□ 0.86
DDX55-211ENST00000544429 CCDC142Q17RM4 750 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 CAVIN1Q6NZI2 390 aaKnown RBP20.44■□□□□ 0.86
DDX55-211ENST00000544429 LMO3Q8TAP4 145 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 ENOX1Q8TC92 643 aaKnown RBP20.44■□□□□ 0.86
DDX55-211ENST00000544429 CNOT6LQ96LI5 555 aaKnown RBP20.44■□□□□ 0.86
DDX55-211ENST00000544429 SYT15Q9BQS2 421 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 COL25A1Q9BXS0 654 aaPredicted RBP20.44■□□□□ 0.86
DDX55-211ENST00000544429 IMPG2Q9BZV3 1241 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 NIF3L1Q9GZT8 377 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 DNAJC25Q9H1X3 360 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 CD320Q9NPF0 282 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 AVENQ9NQS1 362 aaPredicted RBP20.44■□□□□ 0.86
DDX55-211ENST00000544429 ANO10Q9NW15 660 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 CEP72Q9P209 647 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 GTF3C4Q9UKN8 822 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 USTQ9Y2C2 406 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 BDP1A6H8Y1 2624 aa20.44■□□□□ 0.86
DDX55-211ENST00000544429 GREB1Q4ZG55 1949 aa20.43■□□□□ 0.86
DDX55-211ENST00000544429 XYLBO75191 536 aa20.43■□□□□ 0.86
DDX55-211ENST00000544429 RAP1GAPP47736 663 aa20.43■□□□□ 0.86
DDX55-211ENST00000544429 KCNH2Q12809 1159 aa20.43■□□□□ 0.86
DDX55-211ENST00000544429 STX1AQ16623 288 aa20.43■□□□□ 0.86
DDX55-211ENST00000544429 CFAP221Q4G0U5 840 aa20.43■□□□□ 0.86
DDX55-211ENST00000544429 SASS6Q6UVJ0 657 aa20.43■□□□□ 0.86
DDX55-211ENST00000544429 C11orf57Q6ZUT1 292 aaPredicted RBP20.43■□□□□ 0.86
DDX55-211ENST00000544429 FUBP3Q96I24 572 aaKnown RBP eCLIP20.43■□□□□ 0.86
DDX55-211ENST00000544429 UHRF1Q96T88 793 aaPredicted RBP20.43■□□□□ 0.86
DDX55-211ENST00000544429 SNX25Q9H3E2 840 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms