RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ZNF445P59923 1031 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 PSMC1P62191 440 aaKnown RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 ROR1Q01973 937 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 ADCY1Q08828 1119 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 GPR17Q13304 367 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 ORC1Q13415 861 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 ADAM15Q13444 863 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 CUL2Q13617 745 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 RAB33AQ14088 237 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 MRPL58Q14197 206 aaKnown RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 NCAPHQ15003 741 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 MAPRE1Q15691 268 aaKnown RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 CLUL1Q15846 466 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 TAF12Q16514 161 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 NFE2Q16621 373 aaPredicted RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 ARHGAP44Q17R89 818 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 MGAT5BQ3V5L5 792 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 MDH1BQ5I0G3 518 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 INTS6LQ5JSJ4 861 aaKnown RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 PPM1LQ5SGD2 360 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 RARS2Q5T160 578 aaKnown RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 TPGS2Q68CL5 300 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 SLC8B1Q6J4K2 584 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 CES5AQ6NT32 575 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 TRIM65Q6PJ69 517 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 RSPO2Q6UXX9 243 aaPredicted RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 RNF19BQ6ZMZ0 732 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 C4orf50Q6ZRC1 276 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 CCDC149Q6ZUS6 474 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 RRAGAQ7L523 313 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 OSTM1Q86WC4 334 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 ELMOD1Q8N336 334 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 ZNF461Q8TAF7 563 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 KBTBD7Q8WVZ9 684 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 HLA-CQ95604 372 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 PABPC5Q96DU9 382 aaKnown RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 FAM81BQ96LP2 452 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 TMEM209Q96SK2 561 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 SEPT5Q99719 369 aaPredicted RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 ACBD6Q9BR61 282 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 LSM14BQ9BX40 385 aaKnown RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 ZCWPW1Q9H0M4 648 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 PLEKHA4Q9H4M7 779 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 PIDD1Q9HB75 910 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 UBE2TQ9NPD8 197 aaPredicted RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 DZANK1Q9NVP4 752 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 ABI2Q9NYB9 513 aaPredicted RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 GTF3C4Q9UKN8 822 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 BARX2Q9UMQ3 279 aaPredicted RBP6.74□□□□□ -1.33
LTBR-212ENST00000543542 COQ4Q9Y3A0 265 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 PCDHB5Q9Y5E4 795 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 PCDHB4Q9Y5E5 795 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 ATP8B3O60423 1300 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 WDR27A2RRH5 827 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 GTPBP10A4D1E9 387 aaKnown RBP6.73□□□□□ -1.33
LTBR-212ENST00000543542 MTMR11A4FU01 709 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 LGALS16A8MUM7 142 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 H3BQ06 376 aaPredicted RBP6.73□□□□□ -1.33
LTBR-212ENST00000543542 CBFA2T2O43439 604 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 HCRTO43612 131 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 ATP2C2O75185 946 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 XYLBO75191 536 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 C8AP07357 584 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 ATF2P15336 505 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 CD19P15391 556 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 ZNF18P17022 549 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 PTPN1P18031 435 aaKnown RBP6.73□□□□□ -1.33
LTBR-212ENST00000543542 KCNA5P22460 613 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 LMO2P25791 158 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 PON1P27169 355 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 ANXA13P27216 316 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 ALDH1A3P47895 512 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 UBASH3AP57075 661 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 MCCD1P59942 119 aaPredicted RBP6.73□□□□□ -1.33
LTBR-212ENST00000543542 RBM10P98175 930 aaKnown RBP6.73□□□□□ -1.33
LTBR-212ENST00000543542 FANCCQ00597 558 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 SMARCB1Q12824 385 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 DUSP4Q13115 394 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 PLD1Q13393 1074 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 RAPGEF1Q13905 1077 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 VEPH1Q14D04 833 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 MIIPQ5JXC2 388 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 ANKRD54Q6NXT1 300 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 TMEM270Q6UE05 265 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 TMC5Q6UXY8 1006 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 ENOSF1Q7L5Y1 443 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 ACOT1Q86TX2 421 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 UNC93AQ86WB7 457 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 ARHGEF19Q8IW93 802 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 SCN4BQ8IWT1 228 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 C12orf76Q8N812 135 aaPredicted RBP6.73□□□□□ -1.33
LTBR-212ENST00000543542 B3GALNT2Q8NCR0 500 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 NEK11Q8NG66 645 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 OR10T2Q8NGX3 314 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 SLC7A14Q8TBB6 771 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 SPPL2BQ8TCT7 592 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 C2orf15Q8WU43 125 aaKnown RBP6.73□□□□□ -1.33
LTBR-212ENST00000543542 SLC22A17Q8WUG5 538 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 FAXDC2Q96IV6 333 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 HEXIM2Q96MH2 286 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms