RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 SNX9Q9Y5X1 595 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 ALG6Q9Y672 507 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 SCN1AP35498 2009 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 KCNK3O14649 394 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 MGEA5O60502 916 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 SSTR3P32745 418 aaPredicted RBP9.9□□□□□ -0.82
GNE-206ENST00000543356 STILQ15468 1287 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 SGO2Q562F6 1265 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 DENND1BQ6P3S1 775 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 WDTC1Q8N5D0 677 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 MRPL45Q9BRJ2 306 aaKnown RBP9.9□□□□□ -0.82
GNE-206ENST00000543356 SELENOOQ9BVL4 669 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 ST7Q9NRC1 585 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 LCMT1Q9UIC8 334 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 A0A0U1RQF3 1178 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 KPNA7A9QM74 516 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 O00370 1275 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 CTNNA2P26232 953 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 MLH1P40692 756 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 CDK7P50613 346 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 GSCP56915 257 aaPredicted RBP9.89□□□□□ -0.83
GNE-206ENST00000543356 CNGA2Q16280 664 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 AGMOQ6ZNB7 445 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 RASGEF1CQ8N431 466 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 MMGT1Q8N4V1 131 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 NOA1Q8NC60 698 aaKnown RBP9.89□□□□□ -0.83
GNE-206ENST00000543356 MSANTD4Q8NCY6 345 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 GSTCDQ8NEC7 633 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 ACTRT1Q8TDG2 376 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 CD101Q93033 1021 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 PGBD4Q96DM1 585 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 ZFP42Q96MM3 310 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 WNT8AQ9H1J5 351 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 UBN1Q9NPG3 1134 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 PARVAQ9NVD7 372 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 ANAPC7Q9UJX3 599 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 STRIP2Q9ULQ0 834 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 ARL5CA6NH57 179 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 MEIS3P2A8K0S8 358 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 MICAL2O94851 1124 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 FAM163BP0C2L3 166 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 COMTP21964 271 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 DNA2P51530 1060 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 ORC1Q13415 861 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 MAMLD1Q13495 774 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 MESDQ14696 234 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 SOWAHAQ2M3V2 549 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 ICE2Q659A1 982 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 LCLAT1Q6UWP7 414 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 TOP6BLQ8N6T0 577 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 UBL4BQ8N7F7 174 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 SPATA4Q8NEY3 305 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 GAD1Q99259 594 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 PLCD4Q9BRC7 762 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 DNAI2Q9GZS0 605 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 CARD9Q9H257 536 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 GOLGA2P5Q9HBQ8 144 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 CHORDC1Q9UHD1 332 aaPredicted RBP9.89□□□□□ -0.83
GNE-206ENST00000543356 OGDHLQ9ULD0 1010 aa9.89□□□□□ -0.83
GNE-206ENST00000543356 TTC7AQ9ULT0 858 aaPredicted RBP9.89□□□□□ -0.83
GNE-206ENST00000543356 TCRBV5S1A1TA0A578 114 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 SPTLC1O15269 473 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 INPPL1O15357 1258 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 THP07101 528 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 H2AFXP16104 143 aaPredicted RBP9.88□□□□□ -0.83
GNE-206ENST00000543356 MAN1A1P33908 653 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 CTNNA1P35221 906 aaKnown RBP9.88□□□□□ -0.83
GNE-206ENST00000543356 SLC1A1P43005 524 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 TAP1Q03518 808 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 C2orf54Q08AI8 447 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 CLUL1Q15846 466 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 DPH6Q7L8W6 267 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 ERICH1Q86X53 443 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 KBTBD7Q8WVZ9 684 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 LPPQ93052 612 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 MS4A14Q96JA4 679 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 HEXIM2Q96MH2 286 aaKnown RBP9.88□□□□□ -0.83
GNE-206ENST00000543356 ADAM2Q99965 735 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 ANKZF1Q9H8Y5 726 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 RSAD1Q9HA92 442 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 RGS18Q9NS28 235 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 RNF19AQ9NV58 838 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 TANC1Q9C0D5 1861 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 HTTP42858 3142 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 TMEM110-MUSTN1A8MSY1 372 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 PGRMC1O00264 195 aaKnown RBP9.88□□□□□ -0.83
GNE-206ENST00000543356 WARSP23381 471 aaKnown RBP9.88□□□□□ -0.83
GNE-206ENST00000543356 LILRA4P59901 499 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 MBTPS1Q14703 1052 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 PTPROQ16827 1216 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 ARHGAP17Q68EM7 881 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 FAM126BQ8IXS8 530 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 APPL2Q8NEU8 664 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 FEZF2Q8TBJ5 459 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 BTBD6Q96KE9 485 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 TSPYL2Q9H2G4 693 aaPredicted RBP9.88□□□□□ -0.83
GNE-206ENST00000543356 EHD2Q9NZN4 543 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 NME7Q9Y5B8 376 aa9.88□□□□□ -0.83
GNE-206ENST00000543356 TARSL2A2RTX5 802 aaKnown RBP9.87□□□□□ -0.83
GNE-206ENST00000543356 M0QYV0 167 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms