RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 A0A096LPE4 126 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 A0A1B0GVL5 298 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 A0A1W2PPZ6 126 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 POLR2DO15514 142 aaKnown RBP5.58□□□□□ -1.52
CLIP1-217ENST00000543205 GPR39O43194 453 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 GPR32O75388 356 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 PFKMP08237 780 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 ACRP10323 421 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 GHRP10912 638 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 ACTN1P12814 892 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 PFKFB1P16118 471 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 GSTT1P30711 240 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 ARL2P36404 184 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 GPC3P51654 580 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 CRYBB1P53674 252 aaPredicted RBP5.58□□□□□ -1.52
CLIP1-217ENST00000543205 MGAT3Q09327 533 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 LAMTOR4Q0VGL1 99 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 STAT4Q14765 748 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 SPRED3Q2MJR0 410 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 ADAMTSL4Q6UY14 1074 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 MMS22LQ6ZRQ5 1243 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 TOGARAM2Q6ZUX3 1019 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 C1orf186Q6ZWK4 172 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 ZNF410Q86VK4 478 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 LSRQ86X29 649 aaPredicted RBP5.58□□□□□ -1.52
CLIP1-217ENST00000543205 ZNF354CQ86Y25 554 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 WFDC8Q8IUA0 241 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 CEP57L1Q8IYX8 460 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 IL22RA1Q8N6P7 574 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 ST13P5Q8NFI4 369 aaPredicted RBP5.58□□□□□ -1.52
CLIP1-217ENST00000543205 BSNDQ8WZ55 320 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 KIFAP3Q92845 792 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 ZNF668Q96K58 619 aaPredicted RBP5.58□□□□□ -1.52
CLIP1-217ENST00000543205 IFT74Q96LB3 600 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 GBP4Q96PP9 640 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 FERD3LQ96RJ6 166 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 SERINC2Q96SA4 455 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 RUSC1Q9BVN2 902 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 ADAMTS10Q9H324 1103 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 CUEDC2Q9H467 287 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 IL23AQ9NPF7 189 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 GPRC5CQ9NQ84 441 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 PRDM6Q9NQX0 595 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 KAT6AQ92794 2004 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 ALPK3Q96L96 1907 aa5.58□□□□□ -1.52
CLIP1-217ENST00000543205 COL6A3P12111 3177 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 TTC28Q96AY4 2481 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 A0A087WZ62 844 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 NPHP3-ACAD11A0A0J9YXS1 232 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 LRRIQ4A6NIV6 560 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 SNX2O60749 519 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 TBCAO75347 108 aaKnown RBP5.57□□□□□ -1.52
CLIP1-217ENST00000543205 RPS6KA5O75582 802 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 FGBP02675 491 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 PROCP04070 461 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 GUCY2CP25092 1073 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 SYKP43405 635 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 SNRPNP63162 240 aaKnown RBP5.57□□□□□ -1.52
CLIP1-217ENST00000543205 DMP1Q13316 513 aaPredicted RBP5.57□□□□□ -1.52
CLIP1-217ENST00000543205 LPIN1Q14693 890 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 FBXO47Q5MNV8 452 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 PSRC1Q6PGN9 363 aaPredicted RBP5.57□□□□□ -1.52
CLIP1-217ENST00000543205 C1orf228Q6PIY5 440 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 KSR1Q8IVT5 923 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 CNTD1Q8N815 330 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 USP38Q8NB14 1042 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 RNF149Q8NC42 400 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 DEPTORQ8TB45 409 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 LRRC15Q8TF66 581 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 SEPT8Q92599 483 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 APBB2Q92870 758 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 EXOC2Q96KP1 924 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 FDXACB1Q9BRP7 624 aaPredicted RBP5.57□□□□□ -1.52
CLIP1-217ENST00000543205 FBRSQ9HAH7 460 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 MAGEF1Q9HAY2 307 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 POLD4Q9HCU8 107 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 FNIP2Q9P278 1114 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 PHTF1Q9UMS5 762 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 SQORQ9Y6N5 450 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 CCDC169A6NNP5 214 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 GOLGA6L22H0YM25 854 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 PMM2O15305 246 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 RFPL3O75679 317 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 CXCL10P02778 98 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 CELA3AP09093 270 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 SLFN14P0C7P3 912 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 NID1P14543 1247 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 DARSP14868 501 aaKnown RBP5.57□□□□□ -1.52
CLIP1-217ENST00000543205 HOXB4P17483 251 aaPredicted RBP5.57□□□□□ -1.52
CLIP1-217ENST00000543205 TYRP1P17643 537 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 SFPQP23246 707 aaKnown RBP eCLIP5.57□□□□□ -1.52
CLIP1-217ENST00000543205 GLRA2P23416 452 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 CDC25BP30305 580 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 CD52P31358 61 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 MCM4P33991 863 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 CCNFP41002 786 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 NDUFA8P51970 172 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 CAPSQ13938 189 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 GIT2Q14161 759 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms