RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 FMO1Q01740 532 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 CYP27A1Q02318 531 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 ELAVL2Q12926 359 aaKnown RBP11.36□□□□□ -0.59
DDB1-221ENST00000543162 SGO2Q562F6 1265 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 KCNT2Q6UVM3 1135 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 ACOT1Q86TX2 421 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 ZSCAN30Q86W11 494 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 OSTM1Q86WC4 334 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 ACRBPQ8NEB7 543 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 SLC30A5Q8TAD4 765 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 LNX1Q8TBB1 728 aaPredicted RBP11.36□□□□□ -0.59
DDB1-221ENST00000543162 KIAA1524Q8TCG1 905 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 ZNF606Q8WXB4 792 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 TFAP2BQ92481 460 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 DDX1Q92499 740 aaKnown RBP11.36□□□□□ -0.59
DDB1-221ENST00000543162 LUC7LQ9NQ29 371 aaKnown RBP11.36□□□□□ -0.59
DDB1-221ENST00000543162 MARCH5Q9NX47 278 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 DDX43Q9NXZ2 648 aaKnown RBP11.36□□□□□ -0.59
DDB1-221ENST00000543162 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.36□□□□□ -0.59
DDB1-221ENST00000543162 NME7Q9Y5B8 376 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 ADGRG1Q9Y653 693 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 SYN3O14994 580 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 ZSCAN12O43309 604 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 HCRTO43612 131 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 TLL1O43897 1013 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 LCA5LO95447 670 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 PCSK1P29120 753 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 YWHAHQ04917 246 aaPredicted RBP11.35□□□□□ -0.59
DDB1-221ENST00000543162 CCDC122Q5T0U0 273 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 RASIP1Q5U651 963 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 FAM171A1Q5VUB5 890 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 OVOS1Q6IE37 1185 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 FUT10Q6P4F1 479 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 ALKBH5Q6P6C2 394 aaKnown RBP11.35□□□□□ -0.59
DDB1-221ENST00000543162 TRIM72Q6ZMU5 477 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 CRYBG2Q8N1P7 616 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 THEM5Q8N1Q8 247 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 FIBCD1Q8N539 461 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 COLGALT1Q8NBJ5 622 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 OLIG1Q8TAK6 271 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 RNPC3Q96LT9 517 aaKnown RBP11.35□□□□□ -0.59
DDB1-221ENST00000543162 PCDHB18PQ96TA0 734 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 RAD9AQ99638 391 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 DPEP3Q9H4B8 488 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 AAASQ9NRG9 546 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 NAGPAQ9UK23 515 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 PPP2R2CQ9Y2T4 447 aa11.35□□□□□ -0.59
DDB1-221ENST00000543162 O00370 1275 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 ZNF263O14978 683 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 CCP110O43303 1012 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 PTPN1P18031 435 aaKnown RBP11.34□□□□□ -0.59
DDB1-221ENST00000543162 FGFR3P22607 806 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 ACAT1P24752 427 aaKnown RBP11.34□□□□□ -0.59
DDB1-221ENST00000543162 MSNP26038 577 aaKnown RBP11.34□□□□□ -0.59
DDB1-221ENST00000543162 TKTP29401 623 aaKnown RBP11.34□□□□□ -0.59
DDB1-221ENST00000543162 SSTR3P32745 418 aaPredicted RBP11.34□□□□□ -0.59
DDB1-221ENST00000543162 MAGEA1P43355 309 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 PSMC1P62191 440 aaKnown RBP11.34□□□□□ -0.59
DDB1-221ENST00000543162 STILQ15468 1287 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 CNGA2Q16280 664 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 CLEC16AQ2KHT3 1053 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 C9orf50Q5SZB4 431 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 C10orf76Q5T2E6 689 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.34□□□□□ -0.59
DDB1-221ENST00000543162 KIAA1328Q86T90 577 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 TMEM173Q86WV6 379 aaPredicted RBP11.34□□□□□ -0.59
DDB1-221ENST00000543162 CEP57Q86XR8 500 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 PALB2Q86YC2 1186 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 PASD1Q8IV76 773 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 SLC39A11Q8N1S5 342 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 C12orf29Q8N999 325 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 B3GALNT2Q8NCR0 500 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 BCL7CQ8WUZ0 217 aaPredicted RBP11.34□□□□□ -0.59
DDB1-221ENST00000543162 TMEM169Q96HH4 297 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 IGSF21Q96ID5 467 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 SYT15Q9BQS2 421 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 ZSWIM1Q9BR11 485 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 GPR62Q9BZJ7 368 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 FAM49BQ9NUQ9 324 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 TRMT1Q9NXH9 659 aaKnown RBP11.34□□□□□ -0.59
DDB1-221ENST00000543162 SPG21Q9NZD8 308 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 CDH9Q9ULB4 789 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 PCDHGC3Q9UN70 934 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 REXO2Q9Y3B8 237 aaKnown RBP11.34□□□□□ -0.59
DDB1-221ENST00000543162 CEP83Q9Y592 693 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 PCDHB12Q9Y5F1 795 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 PCDHA13Q9Y5I0 950 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 TSC2P49815 1807 aa11.34□□□□□ -0.59
DDB1-221ENST00000543162 TMCO5BA8MYB1 307 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 ATP2C2O75185 946 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 RTN2O75298 545 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 MICAL2O94851 1124 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 OAZ2O95190 189 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 LSM8O95777 96 aaKnown RBP11.33□□□□□ -0.6
DDB1-221ENST00000543162 CFHP08603 1231 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 GZMAP12544 262 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 PPM1AP35813 382 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 TSPY1Q01534 308 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 SHHQ15465 462 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 GOLGA7BQ2TAP0 167 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms