RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 WEE1P30291 646 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 POLR2BP30876 1174 aaKnown RBP14.13□□□□□ -0.15
RTN3-212ENST00000543123 CASP5P51878 434 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 KPNA1P52294 538 aaPredicted RBP14.13□□□□□ -0.15
RTN3-212ENST00000543123 PLCB2Q00722 1185 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 FOXK2Q01167 660 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 MYL7Q01449 175 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 CSTF1Q05048 431 aaKnown RBP14.13□□□□□ -0.15
RTN3-212ENST00000543123 KCNA1Q09470 495 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 LRRC32Q14392 662 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 SURF1Q15526 300 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 ARHGAP29Q52LW3 1261 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 GPR158Q5T848 1215 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 ARID3BQ8IVW6 561 aaPredicted RBP14.13□□□□□ -0.15
RTN3-212ENST00000543123 MAML2Q8IZL2 1156 aaPredicted RBP14.13□□□□□ -0.15
RTN3-212ENST00000543123 TTC9BQ8N6N2 239 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 IQUBQ8NA54 791 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 NOC3LQ8WTT2 800 aaKnown RBP14.13□□□□□ -0.15
RTN3-212ENST00000543123 RUBCNQ92622 972 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 MAGEF1Q9HAY2 307 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 KIAA1586Q9HCI6 787 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 ZSCAN32Q9NX65 697 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 ABI2Q9NYB9 513 aaPredicted RBP14.13□□□□□ -0.15
RTN3-212ENST00000543123 AGAP1Q9UPQ3 857 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 SCN1AP35498 2009 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 EP300Q09472 2414 aaPredicted RBP14.13□□□□□ -0.15
RTN3-212ENST00000543123 CACNA1IQ9P0X4 2223 aa14.13□□□□□ -0.15
RTN3-212ENST00000543123 COL4A3Q01955 1670 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 A0A087X0B3 334 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 NRG2O14511 850 aaPredicted RBP14.12□□□□□ -0.15
RTN3-212ENST00000543123 CUTAO60888 179 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 SOAT2O75908 522 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 DDX6P26196 483 aaKnown RBP eCLIP14.12□□□□□ -0.15
RTN3-212ENST00000543123 NRLP54845 237 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 RBP5P82980 135 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 BFSP1Q12934 665 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 MYO1EQ12965 1108 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 GAREM2Q75VX8 874 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 GPD1LQ8N335 351 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 CSGALNACT2Q8N6G5 542 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 C1orf127Q8N9H9 656 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 LEO1Q8WVC0 666 aaPredicted RBP14.12□□□□□ -0.15
RTN3-212ENST00000543123 SECISBP2LQ93073 1101 aaKnown RBP14.12□□□□□ -0.15
RTN3-212ENST00000543123 ANKRD36BP1Q96IX9 119 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 ACBD6Q9BR61 282 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 IKZF4Q9H2S9 585 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 CHRDQ9H2X0 955 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 TASP1Q9H6P5 420 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 ABCB6Q9NP58 842 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 PRMT8Q9NR22 394 aaPredicted RBP14.12□□□□□ -0.15
RTN3-212ENST00000543123 THG1LQ9NWX6 298 aaKnown RBP14.12□□□□□ -0.15
RTN3-212ENST00000543123 F5P12259 2224 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 NUP210Q8TEM1 1887 aaPredicted RBP14.12□□□□□ -0.15
RTN3-212ENST00000543123 FANCMQ8IYD8 2048 aa14.12□□□□□ -0.15
RTN3-212ENST00000543123 TICRRQ7Z2Z1 1910 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 ZNF233A6NK53 670 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 SOBPA7XYQ1 873 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 ARNTLO00327 626 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 EIF3DO15371 548 aaKnown RBP eCLIP14.11□□□□□ -0.15
RTN3-212ENST00000543123 TNNC2P02585 160 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 COL4A2P08572 1712 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 KRT19P08727 400 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 HAPLN1P10915 354 aaPredicted RBP14.11□□□□□ -0.15
RTN3-212ENST00000543123 ATF6P18850 670 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 PCSK1P29120 753 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 LHX1P48742 406 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 CCR3P51677 355 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 RPL10AP62906 217 aaKnown RBP14.11□□□□□ -0.15
RTN3-212ENST00000543123 ASIC1P78348 528 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 MTAPQ13126 283 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 STXBP5Q5T5C0 1151 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 MAMSTRQ6ZN01 415 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 RALGPS2Q86X27 583 aaPredicted RBP14.11□□□□□ -0.15
RTN3-212ENST00000543123 HSCBQ8IWL3 235 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 PDCL2Q8N4E4 241 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 TOP6BLQ8N6T0 577 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 SNX21Q969T3 373 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 LPIN3Q9BQK8 851 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 CBWD1Q9BRT8 395 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 TRIM9Q9C026 710 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 KBTBD4Q9NVX7 518 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 GDAP2Q9NXN4 497 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 UXTQ9UBK9 157 aaPredicted RBP14.11□□□□□ -0.15
RTN3-212ENST00000543123 UBE4BO95155 1302 aa14.11□□□□□ -0.15
RTN3-212ENST00000543123 DMXL1Q9Y485 3027 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 GOLGA8IPA6NC78 632 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 GOLGA8JA6NMD2 632 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 PRPF6O94906 941 aaKnown RBP14.1□□□□□ -0.15
RTN3-212ENST00000543123 CSH1P0DML2 217 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 CSH2P0DML3 217 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 CCNE1P24864 410 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 AVPR1AP37288 418 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 ID4P47928 161 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 DUOXA2Q1HG44 320 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 CNNM4Q6P4Q7 775 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 ADGRF2Q8IZF7 708 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 ZNF687Q8N1G0 1237 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 CELF5Q8N6W0 485 aaKnown RBP14.1□□□□□ -0.15
RTN3-212ENST00000543123 ZBTB44Q8NCP5 570 aa14.1□□□□□ -0.15
RTN3-212ENST00000543123 BPIFB1Q8TDL5 484 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms