RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 LRRC38Q5VT99 294 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 SCYL3Q8IZE3 742 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 RSRC1Q96IZ7 334 aaKnown RBP17.5■□□□□ 0.39
KDM2B-216ENST00000543025 ZBTB45Q96K62 511 aaPredicted RBP17.5■□□□□ 0.39
KDM2B-216ENST00000543025 SMC6Q96SB8 1091 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 MSTO1Q9BUK6 570 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 TRABDQ9H4I3 376 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 GPBP1L1Q9HC44 474 aaPredicted RBP17.5■□□□□ 0.39
KDM2B-216ENST00000543025 DRG1Q9Y295 367 aaKnown RBP17.5■□□□□ 0.39
KDM2B-216ENST00000543025 KIAA1217Q5T5P2 1943 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 K7ERI5 159 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 NDC80O14777 642 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 HGSO14964 777 aaPredicted RBP17.5■□□□□ 0.39
KDM2B-216ENST00000543025 ANP32DO95626 131 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 CALB1P05937 261 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 TCF4P15884 667 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 KRT15P19012 456 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 NAMPTP43490 491 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 MYO1EQ12965 1108 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 ANKLE1Q8NAG6 615 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 DEPTORQ8TB45 409 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 DENND1AQ8TEH3 1009 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 TMEM143Q96AN5 459 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 NOP53Q9NZM5 478 aaKnown RBP17.5■□□□□ 0.39
KDM2B-216ENST00000543025 ANKFY1Q9P2R3 1169 aa17.5■□□□□ 0.39
KDM2B-216ENST00000543025 ATP2A1O14983 1001 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 RPSAP08865 295 aaKnown RBP17.49■□□□□ 0.39
KDM2B-216ENST00000543025 LACTBP83111 547 aaPredicted RBP17.49■□□□□ 0.39
KDM2B-216ENST00000543025 DNAJC3Q13217 504 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 FASTKD3Q14CZ7 662 aaKnown RBP17.49■□□□□ 0.39
KDM2B-216ENST00000543025 SETDB1Q15047 1291 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 SPOCD1Q6ZMY3 1216 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 RGS9BPQ6ZS82 235 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 MOB2Q70IA6 237 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 PRCCQ92733 491 aaPredicted RBP17.49■□□□□ 0.39
KDM2B-216ENST00000543025 IMPG2Q9BZV3 1241 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 PPCSQ9HAB8 311 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 TXLNGQ9NUQ3 528 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 PHTF1Q9UMS5 762 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 C15orf41Q9Y2V0 281 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 IVNS1ABPQ9Y6Y0 642 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 LRRIQ4A6NIV6 560 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 ETS1P14921 441 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 PTPN7P35236 360 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 YARSP54577 528 aaKnown RBP17.49■□□□□ 0.39
KDM2B-216ENST00000543025 PDE4CQ08493 712 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 ZNF252P-AS1Q0IIN9 211 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 NCOA4Q13772 614 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 TFDP3Q5H9I0 405 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 ZBTB41Q5SVQ8 909 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 SNRNP48Q6IEG0 339 aaKnown RBP17.49■□□□□ 0.39
KDM2B-216ENST00000543025 CENPUQ71F23 418 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 ZBED8Q8IZ13 594 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 OR5B17Q8NGF7 314 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 NSMCE1Q8WV22 266 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 MCEEQ96PE7 176 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 PORCNQ9H237 461 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 VPS37BQ9H9H4 285 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 ETNK1Q9HBU6 452 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 TRIM33Q9UPN9 1127 aa17.49■□□□□ 0.39
KDM2B-216ENST00000543025 CNTNAP2Q9UHC6 1331 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 SUPT20HL2P0C7V6 817 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 GLRA2P23416 452 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 ZNF132P52740 706 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 VCPP55072 806 aaKnown RBP17.48■□□□□ 0.39
KDM2B-216ENST00000543025 ATP11AP98196 1134 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 OASLQ15646 514 aaKnown RBP17.48■□□□□ 0.39
KDM2B-216ENST00000543025 PKN2Q16513 984 aaKnown RBP17.48■□□□□ 0.39
KDM2B-216ENST00000543025 CCDC142Q17RM4 750 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 GNPTABQ3T906 1256 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 NOL9Q5SY16 702 aaKnown RBP17.48■□□□□ 0.39
KDM2B-216ENST00000543025 RNASEH2BQ5TBB1 312 aaKnown RBP17.48■□□□□ 0.39
KDM2B-216ENST00000543025 DNAJC24Q6P3W2 148 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 ASAP3Q8TDY4 903 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 RAB3IPQ96QF0 476 aaPredicted RBP17.48■□□□□ 0.39
KDM2B-216ENST00000543025 TARS2Q9BW92 718 aaKnown RBP17.48■□□□□ 0.39
KDM2B-216ENST00000543025 ZNF408Q9H9D4 720 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 KIF9Q9HAQ2 790 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 SHOC2Q9UQ13 582 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 USH1CQ9Y6N9 552 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 DOCK5Q9H7D0 1870 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 TRPM7Q96QT4 1865 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 hCG_1818297A0A087WSY0 165 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 A0A0B4J269 797 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 A8MUI8 341 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 F8VP50 259 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 ALOX15BO15296 676 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 ATP5HO75947 161 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 ITGAVP06756 1048 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 PDK4Q16654 411 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 HP1BP3Q5SSJ5 553 aaPredicted RBP17.48■□□□□ 0.39
KDM2B-216ENST00000543025 DCUN1D2Q6PH85 259 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 FBXO40Q9UH90 709 aa17.48■□□□□ 0.39
KDM2B-216ENST00000543025 STAM2O75886 525 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 LSM8O95777 96 aaKnown RBP17.47■□□□□ 0.39
KDM2B-216ENST00000543025 IREB2P48200 963 aaKnown RBP17.47■□□□□ 0.39
KDM2B-216ENST00000543025 MOGSQ13724 837 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 VGLL4Q14135 290 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 TTLL12Q14166 644 aaPredicted RBP17.47■□□□□ 0.39
KDM2B-216ENST00000543025 RASA2Q15283 850 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms