RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 KRT31Q15323 416 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 INTS6LQ5JSJ4 861 aaKnown RBP18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 LRSAM1Q6UWE0 723 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 RNF19BQ6ZMZ0 732 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 DCP1BQ8IZD4 617 aaKnown RBP18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 TATDN2Q93075 761 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 MSLNLQ96KJ4 702 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 CBX8Q9HC52 389 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 PRDM6Q9NQX0 595 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 TAB2Q9NYJ8 693 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 CDH9Q9ULB4 789 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 MAFFQ9ULX9 164 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 NME7Q9Y5B8 376 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 HCRTO43612 131 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 WEE2P0C1S8 567 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 CDK11BP21127 795 aaKnown RBP18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 KCNA5P22460 613 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 ACAT1P24752 427 aaKnown RBP18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 SMARCB1Q12824 385 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 LRMPQ12912 555 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 SYCE2Q6PIF2 218 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 GBP6Q6ZN66 633 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 RTL10Q7L3V2 364 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 LRRTM3Q86VH5 581 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 ANKRD20A12PQ8NF67 263 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 NT5C1BQ96P26 610 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 PKMYT1Q99640 499 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 SYT15Q9BQS2 421 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 INTS2Q9H0H0 1204 aaKnown RBP18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 GCNT4Q9P109 453 aa18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 LIMA1Q9UHB6 759 aaKnown RBP18.28■□□□□ 0.52
RABGGTA-203ENST00000543002 MTMR11A4FU01 709 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 LRRC10BA6NIK2 292 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 A8MXQ7 604 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 ZMYND10O75800 440 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 TPM2P07951 284 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 PDGFRBP09619 1106 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 ELF1P32519 619 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 ADCY1Q08828 1119 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 INCA1Q0VD86 236 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 UVSSAQ2YD98 709 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 SLC39A12Q504Y0 691 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 LIN9Q5TKA1 542 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 CCDC149Q6ZUS6 474 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 UNC93AQ86WB7 457 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 TCEAL8Q8IYN2 117 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 CRACR2AQ9BSW2 395 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 TSPY26PQ9H489 355 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 FAM124BQ9H5Z6 455 aaPredicted RBP18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 SFXN1Q9H9B4 322 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 THEGQ9P2T0 379 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 EYSQ5T1H1 3165 aa18.27■□□□□ 0.52
RABGGTA-203ENST00000543002 MTCL1Q9Y4B5 1905 aaKnown RBP18.27■□□□□ 0.51
RABGGTA-203ENST00000543002 SPDYE4A6NLX3 237 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 H3BQ06 376 aaPredicted RBP18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 PES1O00541 588 aaKnown RBP18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 ATP2C2O75185 946 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 SEC24AO95486 1093 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 VNN2O95498 520 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 C8AP07357 584 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 TBXAS1P24557 533 aaPredicted RBP18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 NDST1P52848 882 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 COPB1P53618 953 aaKnown RBP18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 ZNF445P59923 1031 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 CUL2Q13617 745 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 NFE2Q16621 373 aaPredicted RBP18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 EXOC3L4Q17RC7 722 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 FAM171BQ6P995 826 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 LUZP1Q86V48 1076 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 TTC39CQ8N584 583 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 CMASQ8NFW8 434 aaPredicted RBP18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 SLC7A14Q8TBB6 771 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 FAM200AQ8TCP9 573 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 C2orf15Q8WU43 125 aaKnown RBP18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 PGLYRP2Q96PD5 576 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 ARID3AQ99856 593 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 S1PR5Q9H228 398 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 VPS16Q9H269 839 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 CYP4F11Q9HBI6 524 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 TMLHEQ9NVH6 421 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 ZDHHC7Q9NXF8 308 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 HSFX1Q9UBD0 423 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 CD207Q9UJ71 328 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 GTF3C4Q9UKN8 822 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 COL6A3P12111 3177 aa18.26■□□□□ 0.51
RABGGTA-203ENST00000543002 MYBPHLA2RUH7 354 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 PRRG1O14668 218 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 PAPLNO95428 1278 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 ATP1A3P13637 1013 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 HOXA9P31269 272 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 PSMC1P62191 440 aaKnown RBP18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 MAPRE1Q15691 268 aaKnown RBP18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 LEXMQ3ZCV2 418 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 TRIM65Q6PJ69 517 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 APTXQ7Z2E3 356 aaKnown RBP18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 PPM1KQ8N3J5 372 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 C12orf76Q8N812 135 aaPredicted RBP18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 ATAD1Q8NBU5 361 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 SMRP1Q8NCR6 262 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 SPPL2BQ8TCT7 592 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms