RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 A0A0B4J269 797 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 TMEM191CA6NGB0 347 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 LCE2BO14633 110 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ATP2A1O14983 1001 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 MAGEB2O15479 319 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 THAP12O43422 761 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 LIASO43766 372 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ATP2C2O75185 946 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SUN1O94901 812 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 DKK1O94907 266 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 UBOX5O94941 541 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ATP6V1G2O95670 118 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CLTAP09496 248 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 TMEM191BP0C7N4 346 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SUPT20HL2P0C7V6 817 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 BRAFP15056 766 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 TAC1P20366 129 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ATP4AP20648 1035 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 KCNA3P22001 575 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 MMP8P22894 467 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 TBXAS1P24557 533 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 GCAP28676 217 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SLC8A1P32418 973 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ARL2P36404 184 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 PIK3CAP42336 1068 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 LIG4P49917 911 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 NLRP11P59045 1033 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF280AP59817 542 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ACTR2P61160 394 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 PRKCEQ02156 737 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 LMNB2Q03252 620 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CXCL9Q07325 125 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 MCL1Q07820 350 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CCDC15Q0P6D6 951 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 BNIP1Q12981 228 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ACVR2BQ13705 512 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 DOCK1Q14185 1865 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 LRRC14Q15048 493 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 RASA2Q15283 850 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 LLGL1Q15334 1064 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 TRIP13Q15645 432 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SUPT20HL1Q3ZLR7 823 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 DALRD3Q5D0E6 543 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 XKR3Q5GH77 459 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 KIAA1217Q5T5P2 1943 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 C9orf131Q5VYM1 1079 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 IZUMO3Q5VZ72 239 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 RNF43Q68DV7 783 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SLFN12LQ6IEE8 588 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SPOPLQ6IQ16 392 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CGB2Q6NT52 195 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 RGS9BPQ6ZS82 235 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SPATA21Q7Z572 469 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 RCOR2Q8IZ40 523 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 GBP7Q8N8V2 638 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CCDC63Q8NA47 563 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CCHCR1Q8TD31 782 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 NSUN6Q8TEA1 469 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 DENND1AQ8TEH3 1009 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 GIPC2Q8TF65 315 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 GRAMD1AQ96CP6 724 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ATG4CQ96DT6 458 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 WNK4Q96J92 1243 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CDHR1Q96JP9 859 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 C12orf42Q96LP6 360 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 PWWP2AQ96N64 755 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CGRRF1Q99675 332 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 C11orf70Q9BRQ4 267 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 HEMGNQ9BXL5 484 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 PORCNQ9H237 461 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 DHX33Q9H6R0 707 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 JPH1Q9HDC5 661 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 MYOZ2Q9NPC6 264 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 UBN1Q9NPG3 1134 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 FGFR1OP2Q9NVK5 253 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ADAM22Q9P0K1 906 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SLC9A2Q9UBY0 812 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CNTNAP2Q9UHC6 1331 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 AGO2Q9UKV8 859 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 DRG1Q9Y295 367 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ARL2BPQ9Y2Y0 163 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 PCDHB9Q9Y5E1 797 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 COL11A1P12107 1806 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 PHIPQ8WWQ0 1821 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 IGKV6D-21A0A0A0MT36 114 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 FOXO6A8MYZ6 492 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 DNALI1O14645 258 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 TLR3O15455 904 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 PRPF4O43172 522 aaKnown RBP eCLIP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 LSM8O95777 96 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 LDHAP00338 332 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 GH1P01241 217 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 NQO1P15559 274 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 TNNI1P19237 187 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 GLRA2P23416 452 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 GNA15P30679 374 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 FOXN2P32314 431 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 CTHP32929 405 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ICAM3P32942 547 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 CDH5P33151 784 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms