RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 LACTBP83111 547 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 ZBTB17Q13105 803 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 ALCAMQ13740 583 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 MAP7Q14244 749 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 ZNF268Q14587 947 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 Q3C1V9 767 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 LRIG3Q6UXM1 1119 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 STXBP4Q6ZWJ1 553 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 SRPK1Q96SB4 655 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 TRIM31Q9BZY9 425 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 DNAI2Q9GZS0 605 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 XPNPEP1Q9NQW7 623 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 LARSQ9P2J5 1176 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 ATXN10Q9UBB4 475 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 AJAP1Q9UKB5 411 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 DNAJC25-GNG10A0A024R161 153 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 GTPBP10A4D1E9 387 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 RBAK-RBAKDNI3L0D1 243 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 LIN7AO14910 233 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 TMCC1O94876 653 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 KRT16P08779 473 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 ACTN1P12814 892 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 SLC9A1P19634 815 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 PSMC2P35998 433 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 MLH1P40692 756 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 PRKCEQ02156 737 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 XKR9Q5GH70 373 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 SWSAP1Q6NVH7 229 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 FAM186BQ8IYM0 893 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 TMEM161BQ8NDZ6 487 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 DEPTORQ8TB45 409 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 LZICQ8WZA0 190 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 PPP2R3CQ969Q6 453 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 AP1M1Q9BXS5 423 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 KMT5AQ9NQR1 393 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 TRIM33Q9UPN9 1127 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 MAFBQ9Y5Q3 323 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 SQORQ9Y6N5 450 aa8.44□□□□□ -1.06
PDLIM5-221ENST00000542407 hCG_2014768A0A024R1R8 64 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 H0YGN5 161 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 TEX28O15482 410 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 SHBGP04278 402 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 GSTA1P08263 222 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 UBA1P22314 1058 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 NFKBIAP25963 317 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 SOX10P56693 466 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 DHX9Q08211 1270 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 BNIP1Q12981 228 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 HAUS6Q7Z4H7 955 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 LONP2Q86WA8 852 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 PALB2Q86YC2 1186 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 ACMSDQ8TDX5 336 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 PCYT2Q99447 389 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 PRMT1Q99873 361 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 PPP1R12CQ9BZL4 782 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 FAM129AQ9BZQ8 928 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 NEUROG2Q9H2A3 272 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 NLRC4Q9NPP4 1024 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 PCMTD2Q9NV79 361 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 AIPL1Q9NZN9 384 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 NFS1Q9Y697 457 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 MYH10P35580 1976 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 SSU72P8A0A1W2PR75 194 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 SORBS3O60504 671 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 GPR37L1O60883 481 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 FARP2O94887 1054 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 SLC25A27O95847 323 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 BTF3P20290 206 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 NPTX2P47972 431 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 CYP2J2P51589 502 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 JAM2P57087 298 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 CRY1Q16526 586 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 DCAF17Q5H9S7 520 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 ERMARDQ5T6L9 678 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 UNC5DQ6UXZ4 953 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 CYFIP1Q7L576 1253 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 HS2ST1Q7LGA3 356 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 GRAMD2AQ8IUY3 354 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 ZSWIM2Q8NEG5 633 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 APPL2Q8NEU8 664 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 OLIG1Q8TAK6 271 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 ZNF75CPQ92670 426 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 ACCSQ96QU6 501 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 CCT7Q99832 543 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 NTPCRQ9BSD7 190 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 ABCG4Q9H172 646 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 DPH5Q9H2P9 285 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 TMEM206Q9H813 350 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 STK39Q9UEW8 545 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 TCEAL9Q9UHQ7 104 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 ADGRA3Q8IWK6 1321 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 HTR3EA5X5Y0 456 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 TTC34A8MYJ7 566 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 KCNK3O14649 394 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 SLC16A4O15374 487 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 DAPK3O43293 454 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 UCHL3P15374 230 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 PEX3P56589 373 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 RTP1P59025 263 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 BPIFB4P59827 614 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms