RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 HSPBP1Q9NZL4 362 aa21.77■■□□□ 1.08
DDB1-220ENST00000542337 DLGAP2Q9P1A6 1054 aa21.77■■□□□ 1.08
DDB1-220ENST00000542337 UBE4BO95155 1302 aa21.77■■□□□ 1.07
DDB1-220ENST00000542337 PVALEFA0A1B0GWK0 134 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 HEPACAM2A8MVW5 462 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 HAPLN1P10915 354 aaPredicted RBP21.76■■□□□ 1.07
DDB1-220ENST00000542337 GABRR2P28476 465 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 CDC25CP30307 473 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 DNM1Q05193 864 aaKnown RBP21.76■■□□□ 1.07
DDB1-220ENST00000542337 VITQ6UXI7 678 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 LRRTM3Q86VH5 581 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 GLIS3Q8NEA6 775 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 SPATA18Q8TC71 538 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 ACBD6Q9BR61 282 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 MTMR12Q9C0I1 747 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 SEMA4AQ9H3S1 761 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 ZNF334Q9HCZ1 680 aaPredicted RBP21.76■■□□□ 1.07
DDB1-220ENST00000542337 TRPV5Q9NQA5 729 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 INTS13Q9NVM9 706 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 SPATA6Q9NWH7 488 aaPredicted RBP21.76■■□□□ 1.07
DDB1-220ENST00000542337 GDAP2Q9NXN4 497 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 DDX43Q9NXZ2 648 aaKnown RBP21.76■■□□□ 1.07
DDB1-220ENST00000542337 RCOR1Q9UKL0 485 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 SNX9Q9Y5X1 595 aa21.76■■□□□ 1.07
DDB1-220ENST00000542337 CD72P21854 359 aa21.75■■□□□ 1.07
DDB1-220ENST00000542337 AFMP43652 599 aa21.75■■□□□ 1.07
DDB1-220ENST00000542337 LHX1P48742 406 aa21.75■■□□□ 1.07
DDB1-220ENST00000542337 GPR158Q5T848 1215 aa21.75■■□□□ 1.07
DDB1-220ENST00000542337 ZC3H14Q6PJT7 736 aaKnown RBP21.75■■□□□ 1.07
DDB1-220ENST00000542337 EPM2AIP1Q7L775 607 aaPredicted RBP21.75■■□□□ 1.07
DDB1-220ENST00000542337 TOP6BLQ8N6T0 577 aa21.75■■□□□ 1.07
DDB1-220ENST00000542337 CSGALNACT1Q8TDX6 532 aa21.75■■□□□ 1.07
DDB1-220ENST00000542337 GIPC2Q8TF65 315 aa21.75■■□□□ 1.07
DDB1-220ENST00000542337 FNBP1Q96RU3 617 aa21.75■■□□□ 1.07
DDB1-220ENST00000542337 LPIN3Q9BQK8 851 aa21.75■■□□□ 1.07
DDB1-220ENST00000542337 BLZF1Q9H2G9 400 aa21.75■■□□□ 1.07
DDB1-220ENST00000542337 CGNQ9P2M7 1197 aaKnown RBP21.75■■□□□ 1.07
DDB1-220ENST00000542337 ZMYM5Q9UJ78 669 aa21.75■■□□□ 1.07
DDB1-220ENST00000542337 L1RE1Q9UN81 338 aa21.75■■□□□ 1.07
DDB1-220ENST00000542337 MYH15Q9Y2K3 1946 aa21.74■■□□□ 1.07
DDB1-220ENST00000542337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.74■■□□□ 1.07
DDB1-220ENST00000542337 NRG2O14511 850 aaPredicted RBP21.74■■□□□ 1.07
DDB1-220ENST00000542337 LAMTOR5O43504 91 aa21.74■■□□□ 1.07
DDB1-220ENST00000542337 LRRN2O75325 713 aa21.74■■□□□ 1.07
DDB1-220ENST00000542337 PRPF40AO75400 957 aaKnown RBP21.74■■□□□ 1.07
DDB1-220ENST00000542337 PCSK1P29120 753 aa21.74■■□□□ 1.07
DDB1-220ENST00000542337 CDR1P51861 262 aa21.74■■□□□ 1.07
DDB1-220ENST00000542337 GAREM2Q75VX8 874 aa21.74■■□□□ 1.07
DDB1-220ENST00000542337 CBWD2Q8IUF1 395 aa21.74■■□□□ 1.07
DDB1-220ENST00000542337 ARID3BQ8IVW6 561 aaPredicted RBP21.74■■□□□ 1.07
DDB1-220ENST00000542337 RDH13Q8NBN7 331 aa21.74■■□□□ 1.07
DDB1-220ENST00000542337 HPDLQ96IR7 371 aa21.74■■□□□ 1.07
DDB1-220ENST00000542337 AGPAT3Q9NRZ7 376 aa21.74■■□□□ 1.07
DDB1-220ENST00000542337 MTF2Q9Y483 593 aaPredicted RBP21.74■■□□□ 1.07
DDB1-220ENST00000542337 ZFHX2Q9C0A1 2572 aaPredicted RBP21.74■■□□□ 1.07
DDB1-220ENST00000542337 PRR23AA6NEV1 266 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 GLULP15104 373 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 ATF6P18850 670 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 HOXD13P35453 343 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 RPL10AP62906 217 aaKnown RBP21.73■■□□□ 1.07
DDB1-220ENST00000542337 PKP1Q13835 747 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 SNRNP35Q16560 246 aaKnown RBP21.73■■□□□ 1.07
DDB1-220ENST00000542337 LMBRD2Q68DH5 695 aaPredicted RBP21.73■■□□□ 1.07
DDB1-220ENST00000542337 DPH6Q7L8W6 267 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 ASCL5Q7RTU5 278 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 WDR49Q8IV35 697 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 NELFCDQ8IXH7 590 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 ADGRF2Q8IZF7 708 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 XXYLT1Q8NBI6 393 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 SCFD1Q8WVM8 642 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 PI4K2AQ9BTU6 479 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 TASP1Q9H6P5 420 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 SLC39A2Q9NP94 309 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 SIX4Q9UIU6 781 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 GTF3C3Q9Y5Q9 886 aa21.73■■□□□ 1.07
DDB1-220ENST00000542337 CHADO15335 359 aa21.72■■□□□ 1.07
DDB1-220ENST00000542337 SLFN14P0C7P3 912 aa21.72■■□□□ 1.07
DDB1-220ENST00000542337 SP9P0CG40 484 aa21.72■■□□□ 1.07
DDB1-220ENST00000542337 DLATP10515 647 aaKnown RBP21.72■■□□□ 1.07
DDB1-220ENST00000542337 TNNI1P19237 187 aa21.72■■□□□ 1.07
DDB1-220ENST00000542337 TARSP26639 723 aaKnown RBP21.72■■□□□ 1.07
DDB1-220ENST00000542337 CYP2J2P51589 502 aa21.72■■□□□ 1.07
DDB1-220ENST00000542337 INTS6LQ5JSJ4 861 aaKnown RBP21.72■■□□□ 1.07
DDB1-220ENST00000542337 C1orf228Q6PIY5 440 aa21.72■■□□□ 1.07
DDB1-220ENST00000542337 CXorf38Q8TB03 319 aa21.72■■□□□ 1.07
DDB1-220ENST00000542337 GOLGA5Q8TBA6 731 aa21.72■■□□□ 1.07
DDB1-220ENST00000542337 LEO1Q8WVC0 666 aaPredicted RBP21.72■■□□□ 1.07
DDB1-220ENST00000542337 FAM3CQ92520 227 aa21.72■■□□□ 1.07
DDB1-220ENST00000542337 ABCB6Q9NP58 842 aa21.72■■□□□ 1.07
DDB1-220ENST00000542337 OBP2AQ9NY56 170 aa21.72■■□□□ 1.07
DDB1-220ENST00000542337 PIAS3Q9Y6X2 628 aa21.72■■□□□ 1.07
DDB1-220ENST00000542337 CLIC2O15247 247 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 TGFB1I1O43294 461 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 CSH1P0DML2 217 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 CSH2P0DML3 217 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 CASP1P29466 404 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 RPS9P46781 194 aaKnown RBP21.71■■□□□ 1.07
DDB1-220ENST00000542337 KRT85P78386 507 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 CUL4BQ13620 913 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 STXBP5Q5T5C0 1151 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms