RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SGSM3Q96HU1 749 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 HES6Q96HZ4 224 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 TTC25Q96NG3 672 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 TMEM237Q96Q45 408 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 HUS1O60921 280 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 SRGAP2BP0DMP2 458 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 CRLF3Q8IUI8 442 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 ABRAQ8N0Z2 381 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 GBP7Q8N8V2 638 aaPredicted RBP16.9■□□□□ 0.3
VARS2-212ENST00000542001 CLMNQ96JQ2 1002 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 APOL2Q9BQE5 337 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 ARMC2Q8NEN0 867 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 RAB3IL1Q8TBN0 382 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 PGBD4Q96DM1 585 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 PCDHA3Q9Y5H8 950 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 ROBO3Q96MS0 1386 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 IGKV6D-41A0A0C4DH26 115 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 OGTO15294 1046 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 DCTN3O75935 186 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 TAS2R40P59535 323 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 PKN2Q16513 984 aaKnown RBP16.89■□□□□ 0.29
VARS2-212ENST00000542001 C4orf50Q6ZRC1 276 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 PRCCQ92733 491 aaPredicted RBP16.89■□□□□ 0.29
VARS2-212ENST00000542001 DCLK3Q9C098 648 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 FHDC1Q9C0D6 1143 aaPredicted RBP16.89■□□□□ 0.29
VARS2-212ENST00000542001 C2orf40Q9H1Z8 148 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 TRIM49D1C9J1S8 452 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 ZNF286BP0CG31 522 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 TYK2P29597 1187 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 HOXD13P35453 343 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 HYIQ5T013 277 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 LONP2Q86WA8 852 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 WNK4Q96J92 1243 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 TIPINQ9BVW5 301 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 TLK1Q9UKI8 766 aa16.89■□□□□ 0.29
VARS2-212ENST00000542001 UMODL1Q5DID0 1318 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 NEMP1O14524 444 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 KRT38O76015 456 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 POU5F1BQ06416 359 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 SLC12A1Q13621 1099 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 PIGHQ14442 188 aaPredicted RBP16.88■□□□□ 0.29
VARS2-212ENST00000542001 KLHL38Q2WGJ6 581 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 GRAMD1BQ3KR37 738 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 DCAF6Q58WW2 860 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 KIAA1683Q9H0B3 1180 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 NOD2Q9HC29 1040 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 CASZ1Q86V15 1759 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 SOX11P35716 441 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 POLE2P56282 527 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 DRP2Q13474 957 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 ASTE1Q2TB18 679 aaPredicted RBP16.88■□□□□ 0.29
VARS2-212ENST00000542001 VSIG10LQ86VR7 867 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 AP5M1Q9H0R1 490 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 C12orf65Q9H3J6 166 aaKnown RBP16.88■□□□□ 0.29
VARS2-212ENST00000542001 NINJ2Q9NZG7 142 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 C19orf81C9J6K1 198 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 GPC4O75487 556 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 RPS6KA2Q15349 733 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 TDRD10Q5VZ19 366 aaKnown RBP16.88■□□□□ 0.29
VARS2-212ENST00000542001 FAM131BQ86XD5 332 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 ARID3BQ8IVW6 561 aaPredicted RBP16.88■□□□□ 0.29
VARS2-212ENST00000542001 TSSK1BQ9BXA7 367 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 UNKQ9C0B0 810 aaKnown RBP16.88■□□□□ 0.29
VARS2-212ENST00000542001 PSMC3IPQ9P2W1 217 aaPredicted RBP16.88■□□□□ 0.29
VARS2-212ENST00000542001 TRIM33Q9UPN9 1127 aa16.88■□□□□ 0.29
VARS2-212ENST00000542001 GH1P01241 217 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 FECHP22830 423 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 MXD4Q14582 209 aaPredicted RBP16.87■□□□□ 0.29
VARS2-212ENST00000542001 EML3Q32P44 896 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 TTC27Q6P3X3 843 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 MAP4K3Q8IVH8 894 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 DAW1Q8N136 415 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 NDUFAF2Q8N183 169 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 GBP5Q96PP8 586 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 SLCO1B3Q9NPD5 702 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 DDX56Q9NY93 547 aaKnown RBP16.87■□□□□ 0.29
VARS2-212ENST00000542001 PHTF1Q9UMS5 762 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 KAT6AQ92794 2004 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 SLC26A4O43511 780 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 TRAPPC3O43617 180 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 TRPA1O75762 1119 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 HSPA4LO95757 839 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 GARTP22102 1010 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 LAMTOR4Q0VGL1 99 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 MMEL1Q495T6 779 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 SPOCD1Q6ZMY3 1216 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 RPAINQ86UA6 219 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 FAM71AQ8IYT1 594 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 LRRC57Q8N9N7 239 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 HES2Q9Y543 173 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 BCL9LQ86UU0 1499 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 APOL1O14791 398 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 SKAP2O75563 359 aaPredicted RBP16.87■□□□□ 0.29
VARS2-212ENST00000542001 FDX1P10109 184 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 GOLGA7BQ2TAP0 167 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 TMC2Q8TDI7 906 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 SHC3Q92529 594 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 SIX2Q9NPC8 291 aa16.87■□□□□ 0.29
VARS2-212ENST00000542001 MYH13Q9UKX3 1938 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 ADM5C9JUS6 153 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms