RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 TUBE1Q9UJT0 475 aa5.44□□□□□ -1.54
SNHG1-218ENST00000541615 SNX12Q9UMY4 172 aa5.44□□□□□ -1.54
SNHG1-218ENST00000541615 STARD13Q9Y3M8 1113 aa5.44□□□□□ -1.54
SNHG1-218ENST00000541615 RWDD3Q9Y3V2 267 aa5.44□□□□□ -1.54
SNHG1-218ENST00000541615 HYOU1Q9Y4L1 999 aa5.44□□□□□ -1.54
SNHG1-218ENST00000541615 SNX14Q9Y5W7 946 aa5.44□□□□□ -1.54
SNHG1-218ENST00000541615 EID1Q9Y6B2 187 aa5.44□□□□□ -1.54
SNHG1-218ENST00000541615 TCHHQ07283 1943 aa5.44□□□□□ -1.54
SNHG1-218ENST00000541615 PCDH11XQ9BZA7 1347 aa5.44□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF335Q9H4Z2 1342 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-218ENST00000541615 SUPT6HQ7KZ85 1726 aaKnown RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PTCH1Q13635 1447 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 A0A1B0GTH6 734 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 KRBA1A5PL33 1030 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PSMD9O00233 223 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 VWA5AO00534 786 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 E2F3O00716 465 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 CES2O00748 559 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 TBX3O15119 743 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 RAD51BO15315 384 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 GPR37O15354 613 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 MAGEB3O15480 346 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ZBTB14O43829 449 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PEX1O43933 1283 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 TLR2O60603 784 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 CCDC22O60826 627 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 MFAP3LO75121 409 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 UPP2O95045 317 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 EPN2O95208 641 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 SNAPINO95295 136 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PSMG1O95456 288 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 NTRK1P04629 796 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 CAPNS1P04632 268 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ZCCHC18P0CG32 403 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PRKAR1AP10644 381 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 UQCRBP14927 111 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 RAC2P15153 192 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PDE6AP16499 860 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 MUTP22033 750 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 CTNNA2P26232 953 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 IGHMBP2P38935 993 aaKnown RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 STAT1P42224 750 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 MAGEA11P43364 429 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 VPS41P49754 854 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 GDI2P50395 445 aaKnown RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 YARSP54577 528 aaKnown RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 RAC1P63000 192 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ADAM17P78536 824 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 CYP4F8P98187 520 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 FKBP4Q02790 459 aaKnown RBP eCLIP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 SPAG1Q07617 926 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 LGALS3BPQ08380 585 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 FUT2Q10981 343 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 TRIM32Q13049 653 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 TRIM28Q13263 835 aaKnown RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 GIT2Q14161 759 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 C16orf72Q14CZ0 275 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 EFTUD2Q15029 972 aaKnown RBP eCLIP5.43□□□□□ -1.545e-23■■■■■ 44.5
SNHG1-218ENST00000541615 SNX17Q15036 470 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 TRIM16LQ309B1 348 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF792Q3KQV3 632 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 LSM12Q3MHD2 195 aaKnown RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ADCK5Q3MIX3 580 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 AGAP7PQ5VUJ5 663 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 SLFN13Q68D06 897 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 SDE2Q6IQ49 451 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ERAP2Q6P179 960 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PGM2L1Q6PCE3 622 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 TMC5Q6UXY8 1006 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 TPTE2Q6XPS3 522 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 C4orf50Q6ZRC1 276 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ARHGAP36Q6ZRI8 547 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PIK3AP1Q6ZUJ8 805 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ILDR2Q71H61 639 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PRUNE1Q86TP1 453 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 CCDC84Q86UT8 332 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 COL23A1Q86Y22 540 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 SULF1Q8IWU6 871 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 MB21D2Q8IYB1 491 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 KIAA2013Q8IYS2 634 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 AHI1Q8N157 1196 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 TCAIMQ8N3R3 496 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 KBTBD3Q8NAB2 608 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 RDH13Q8NBN7 331 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 KCT2Q8NC54 265 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PDPRQ8NCN5 879 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 CATSPER1Q8NEC5 780 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 FLAD1Q8NFF5 587 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ST13P5Q8NFI4 369 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 NEDD1Q8NHV4 660 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF398Q8TD17 642 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 TRUB1Q8WWH5 349 aaKnown RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 HPS1Q92902 700 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 VPS33AQ96AX1 596 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ERLEC1Q96DZ1 483 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 B3GALT6Q96L58 329 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF641Q96N77 438 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 TSGA13Q96PP4 275 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 SNX18Q96RF0 628 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 GMLQ99445 158 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms