RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 STKLD1Q8NE28 680 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 OR10T2Q8NGX3 314 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 USP13Q92995 863 aaPredicted RBP12.83□□□□□ -0.36
COPA-205ENST00000541366 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 RUSC1Q9BVN2 902 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 TPSD1Q9BZJ3 242 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 TMEM9BQ9NQ34 198 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 DDX19AQ9NUU7 478 aaKnown RBP12.83□□□□□ -0.36
COPA-205ENST00000541366 KLK13Q9UKR3 277 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 MYO16Q9Y6X6 1858 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 TMEM8BA6NDV4 472 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 SOBPA7XYQ1 873 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 CEACAM1P13688 526 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 CD44P16070 742 aaKnown RBP12.82□□□□□ -0.36
COPA-205ENST00000541366 BCKDHBP21953 392 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 WEE1P30291 646 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 LRPAP1P30533 357 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 TNFSF9P41273 254 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 DGKEP52429 567 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 RAD51AP2Q09MP3 1159 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 DMP1Q13316 513 aaPredicted RBP12.82□□□□□ -0.36
COPA-205ENST00000541366 DMC1Q14565 340 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 NOLC1Q14978 699 aaKnown RBP eCLIP12.82□□□□□ -0.36
COPA-205ENST00000541366 ZBTB6Q15916 424 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 SLC39A12Q504Y0 691 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 TMEM150AQ86TG1 271 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 ITIH5Q86UX2 942 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 MAB21L3Q8N8X9 362 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 NSUN7Q8NE18 718 aaKnown RBP12.82□□□□□ -0.36
COPA-205ENST00000541366 DENND4CQ5VZ89 1909 aa12.82□□□□□ -0.36
COPA-205ENST00000541366 SETXQ7Z333 2677 aaKnown RBP12.81□□□□□ -0.36
COPA-205ENST00000541366 TTC26A0AVF1 554 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 LACTBL1A8MY62 500 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 KHNYNO15037 678 aaKnown RBP12.81□□□□□ -0.36
COPA-205ENST00000541366 APBB3O95704 486 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 FGF19O95750 216 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 CSRP1P21291 193 aaKnown RBP12.81□□□□□ -0.36
COPA-205ENST00000541366 DRD1P21728 446 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 CDC25CP30307 473 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 GJA4P35212 333 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 PSMD2Q13200 908 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 MYBPC2Q14324 1141 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 PTPAQ15257 358 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 ME3Q16798 604 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 MGAT5BQ3V5L5 792 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 PMS2CLQ68D20 193 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 TXNDC8Q6A555 127 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 ARMCX5Q6P1M9 558 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 SYT13Q7L8C5 426 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 TTC16Q8NEE8 873 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 SENP8Q96LD8 212 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 P2RY13Q9BPV8 354 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 OXCT2Q9BYC2 517 aaPredicted RBP12.81□□□□□ -0.36
COPA-205ENST00000541366 GCN1Q92616 2671 aaKnown RBP12.81□□□□□ -0.36
COPA-205ENST00000541366 TSC2P49815 1807 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 KIAA1549LQ6ZVL6 1849 aa12.81□□□□□ -0.36
COPA-205ENST00000541366 PI4KAP42356 2102 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 SCN1AP35498 2009 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 SPAARA0A1B0GVQ0 90 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 PP2D1A8MPX8 630 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 TAF4O00268 1085 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 TOM1L1O75674 476 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 TYMPP19971 482 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 MATR3P43243 847 aaKnown RBP eCLIP12.8□□□□□ -0.36
COPA-205ENST00000541366 NBR1Q14596 966 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 KARSQ15046 597 aaKnown RBP12.8□□□□□ -0.36
COPA-205ENST00000541366 HAUS3Q68CZ6 603 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 RINT1Q6NUQ1 792 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 KCNK18Q7Z418 384 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 CYP2U1Q7Z449 544 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 LRRTM3Q86VH5 581 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 PIGKQ92643 395 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 GCNAQ96QF7 691 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 DAXXQ9UER7 740 aaPredicted RBP12.8□□□□□ -0.36
COPA-205ENST00000541366 LRWD1Q9UFC0 647 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 EBF1Q9UH73 591 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 TBX20Q9UMR3 447 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 UBQLN1Q9UMX0 589 aaKnown RBP12.8□□□□□ -0.36
COPA-205ENST00000541366 RBM19Q9Y4C8 960 aaKnown RBP12.8□□□□□ -0.36
COPA-205ENST00000541366 OBSL1O75147 1896 aa12.8□□□□□ -0.36
COPA-205ENST00000541366 CLDN3O15551 220 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 F11P03951 625 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 CLTAP09496 248 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 HMGA1P17096 107 aaKnown RBP12.79□□□□□ -0.36
COPA-205ENST00000541366 MUTP22033 750 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 CDC25AP30304 524 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 AVPR1AP37288 418 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 MAPK8P45983 427 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 DHPSP49366 369 aaPredicted RBP12.79□□□□□ -0.36
COPA-205ENST00000541366 GPR15P49685 360 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 NLRP12P59046 1061 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 LILRA4P59901 499 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 MCL1Q07820 350 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 BFSP1Q12934 665 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 VEPH1Q14D04 833 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 TAF12Q16514 161 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 ANO7Q6IWH7 933 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 C1orf186Q6ZWK4 172 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 C4orf32Q8N8J7 132 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms