RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 RDM1Q8NG50 284 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 RNPC3Q96LT9 517 aaKnown RBP15.99■□□□□ 0.15
HMGA2-210ENST00000541363 MANSC1Q9H8J5 431 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 PLIN5Q00G26 463 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 PGS1Q32NB8 556 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 EEF2KO00418 725 aaKnown RBP15.98■□□□□ 0.15
HMGA2-210ENST00000541363 CNPP09543 421 aaKnown RBP15.98■□□□□ 0.15
HMGA2-210ENST00000541363 ERP27Q96DN0 273 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 HMG20AQ9NP66 347 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 NEU2Q9Y3R4 380 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 INSRP06213 1382 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 USP17L3A6NCW0 530 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 USP17L4A6NCW7 530 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 PIK3CDO00329 1044 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 ERVK-10P10266 1014 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 NOS3P29474 1203 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 USP17L1Q7RTZ2 530 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 TRPM5Q9NZQ8 1165 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 UBA2Q9UBT2 640 aaPredicted RBP15.98■□□□□ 0.15
HMGA2-210ENST00000541363 DAPK2Q9UIK4 370 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 ABCB11O95342 1321 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 VCLP18206 1134 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 ARF5P84085 180 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 IFNLR1Q8IU57 520 aaPredicted RBP15.98■□□□□ 0.15
HMGA2-210ENST00000541363 SLC44A2Q8IWA5 706 aaPredicted RBP15.98■□□□□ 0.15
HMGA2-210ENST00000541363 PABPC5Q96DU9 382 aaKnown RBP15.98■□□□□ 0.15
HMGA2-210ENST00000541363 MMP19Q99542 508 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 SENP7Q9BQF6 1050 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 GREM2Q9H772 168 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 LONRF1Q17RB8 773 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 C2orf69Q8N8R5 385 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.98■□□□□ 0.15
HMGA2-210ENST00000541363 C18orf8Q96DM3 657 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 RNF112Q9ULX5 631 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 PADI4Q9UM07 663 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 POU1F1P28069 291 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 EIF4A1P60842 406 aaKnown RBP15.98■□□□□ 0.15
HMGA2-210ENST00000541363 CAMK2GQ13555 558 aaPredicted RBP15.98■□□□□ 0.15
HMGA2-210ENST00000541363 CBFBQ13951 182 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 CEP44Q9C0F1 390 aa15.98■□□□□ 0.15
HMGA2-210ENST00000541363 MYH10P35580 1976 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 SSH3Q8TE77 659 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 MAP4K1Q92918 833 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 YWHABP31946 246 aaKnown RBP15.97■□□□□ 0.15
HMGA2-210ENST00000541363 GRK3P35626 688 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 GLYCTKQ8IVS8 523 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 DBNDD1Q9H9R9 158 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 TRMT6Q9UJA5 497 aaKnown RBP15.97■□□□□ 0.15
HMGA2-210ENST00000541363 UGGT2Q9NYU1 1516 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 ITIH2P19823 946 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 KCNJ6P48051 423 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 SFSWAPQ12872 951 aaKnown RBP15.97■□□□□ 0.15
HMGA2-210ENST00000541363 NLGN1Q8N2Q7 840 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 EAF2Q96CJ1 260 aaPredicted RBP15.97■□□□□ 0.15
HMGA2-210ENST00000541363 FAR2Q96K12 515 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 CCT8L2Q96SF2 557 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 VPS33BQ9H267 617 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 DBR1Q9UK59 544 aaKnown RBP15.97■□□□□ 0.15
HMGA2-210ENST00000541363 TBKBP1A7MCY6 615 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 P4HA2O15460 535 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 ARHGDIBP52566 201 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 CHI3L2Q15782 390 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 A0A087X0T9 212 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 H3BMM5 538 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 PRRG1O14668 218 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 ERN1O75460 977 aaKnown RBP15.97■□□□□ 0.15
HMGA2-210ENST00000541363 MED26O95402 600 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 SCP2P22307 547 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 TMEM179Q6ZVK1 233 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 SLC25A41Q8N5S1 370 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 VPS33AQ96AX1 596 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 BPIFA3Q9BQP9 254 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 TGFBR2P37173 567 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 ITGA1P56199 1179 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 C3orf62Q6ZUJ4 267 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 USP33Q8TEY7 942 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 SPATA33Q96N06 139 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 SERPINB12Q96P63 405 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 AMACRQ9UHK6 382 aa15.97■□□□□ 0.15
HMGA2-210ENST00000541363 SNRPAP09012 282 aaKnown RBP15.96■□□□□ 0.15
HMGA2-210ENST00000541363 FAM83BQ5T0W9 1011 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 AGBL2Q5U5Z8 902 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 AGAP9Q5VTM2 703 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 CYFIP1Q7L576 1253 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 USP13Q92995 863 aaPredicted RBP15.96■□□□□ 0.15
HMGA2-210ENST00000541363 ZNF333Q96JL9 665 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 SLC9A7Q96T83 725 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 KLHL1Q9NR64 748 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 AGO2Q9UKV8 859 aaKnown RBP15.96■□□□□ 0.15
HMGA2-210ENST00000541363 KIAA0232Q92628 1395 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 FAM220BPB1ANY3 271 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 CLEC16AQ2KHT3 1053 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 C4orf22Q6V702 233 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 MIER2Q8N344 545 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 RBM15Q96T37 977 aaKnown RBP eCLIP15.96■□□□□ 0.15
HMGA2-210ENST00000541363 AGPAT1Q99943 283 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 ZBTB1Q9Y2K1 713 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 RGS20O76081 388 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 IFNAR1P17181 557 aa15.96■□□□□ 0.15
HMGA2-210ENST00000541363 PRCPP42785 496 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms