RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PHACTR2O75167 634 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 TRIM49P0CI25 452 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 TRIM49CP0CI26 452 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 LAMP2P13473 410 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 PTPN2P17706 415 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 WARSP23381 471 aaKnown RBP18.11■□□□□ 0.49
CD9-209ENST00000540891 LMO2P25791 158 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 ATICP31939 592 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 LHX1P48742 406 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 ZXDAP98168 799 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 MYL7Q01449 175 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 ENPEPQ07075 957 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 NCOA4Q13772 614 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 CAMK4Q16566 473 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 WDR72Q3MJ13 1102 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 PRSS36Q5K4E3 855 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 HS6ST3Q8IZP7 471 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 EDAQ92838 391 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 CORO1BQ9BR76 489 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 LRRC3Q9BY71 257 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 SMOC2Q9H3U7 446 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 FAM86C2PA6NEL3 165 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 CETN3O15182 167 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 ATF6P18850 670 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 CCNE1P24864 410 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 CCR2P41597 374 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 EPHA5P54756 1037 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 TSPY1Q01534 308 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 SMARCB1Q12824 385 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 NPAS3Q8IXF0 933 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 DCP1BQ8IZD4 617 aaKnown RBP18.1■□□□□ 0.49
CD9-209ENST00000540891 C2orf15Q8WU43 125 aaKnown RBP18.1■□□□□ 0.49
CD9-209ENST00000540891 FGF13Q92913 245 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 SYAP1Q96A49 352 aaPredicted RBP18.1■□□□□ 0.49
CD9-209ENST00000540891 TCEAL4Q96EI5 215 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 DHTKD1Q96HY7 919 aaPredicted RBP18.1■□□□□ 0.49
CD9-209ENST00000540891 MMS19Q96T76 1030 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 KCNK12Q9HB15 430 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 LMBRD1Q9NUN5 540 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 CDH7Q9ULB5 785 aa18.1■□□□□ 0.49
CD9-209ENST00000540891 MYBPHLA2RUH7 354 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 PSMA7O14818 248 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 ATP2C2O75185 946 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 TACC1O75410 805 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 MOSPD3O75425 235 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 FAM163BP0C2L3 166 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 HAPLN1P10915 354 aaPredicted RBP18.09■□□□□ 0.49
CD9-209ENST00000540891 KRT13P13646 458 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 GCLMP48507 274 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 TNNC1P63316 161 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 FKBP3Q00688 224 aaKnown RBP18.09■□□□□ 0.49
CD9-209ENST00000540891 LRRC63Q05C16 580 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 ZNF699Q32M78 642 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 MGAT5BQ3V5L5 792 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 FAM171BQ6P995 826 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 TMC8Q8IU68 726 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 ST13P5Q8NFI4 369 aaPredicted RBP18.09■□□□□ 0.49
CD9-209ENST00000540891 SPPL2BQ8TCT7 592 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 RSAD2Q8WXG1 361 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 ING5Q8WYH8 240 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 ZNF512Q96ME7 567 aaPredicted RBP18.09■□□□□ 0.49
CD9-209ENST00000540891 SEPT5Q99719 369 aaPredicted RBP18.09■□□□□ 0.49
CD9-209ENST00000540891 TSG101Q99816 390 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 SYT15Q9BQS2 421 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 C1QTNF1Q9BXJ1 281 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 SMYD3Q9H7B4 428 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 ABI2Q9NYB9 513 aaPredicted RBP18.09■□□□□ 0.49
CD9-209ENST00000540891 KIAA1468Q9P260 1216 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 NXF1Q9UBU9 619 aaKnown RBP18.09■□□□□ 0.49
CD9-209ENST00000540891 GTF3C4Q9UKN8 822 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 SORCS3Q9UPU3 1222 aa18.09■□□□□ 0.49
CD9-209ENST00000540891 MRPS23Q9Y3D9 190 aaKnown RBP18.09■□□□□ 0.49
CD9-209ENST00000540891 ANHXE9PGG2 379 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 SLC16A3O15427 465 aaKnown RBP18.08■□□□□ 0.48
CD9-209ENST00000540891 GPR37L1O60883 481 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 HLA-DRAP01903 254 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 EPB41P11171 864 aaKnown RBP18.08■□□□□ 0.48
CD9-209ENST00000540891 CEBPBP17676 345 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 PCSK1P29120 753 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 PPP1R2P41236 205 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 ALDH1A3P47895 512 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 TUFMP49411 452 aaKnown RBP18.08■□□□□ 0.48
CD9-209ENST00000540891 PSMC1P62191 440 aaKnown RBP18.08■□□□□ 0.48
CD9-209ENST00000540891 PLD1Q13393 1074 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 NFE2Q16621 373 aaPredicted RBP18.08■□□□□ 0.48
CD9-209ENST00000540891 IQCEQ6IPM2 695 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 KLHL10Q6JEL2 608 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 TTI2Q6NXR4 508 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 ELMOD1Q8N336 334 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 PSMG2Q969U7 264 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 DUSP9Q99956 384 aaKnown RBP18.08■□□□□ 0.48
CD9-209ENST00000540891 LPIN3Q9BQK8 851 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 SDCBP2Q9H190 292 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 CRTAC1Q9NQ79 661 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 CDH9Q9ULB4 789 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 PCDHB5Q9Y5E4 795 aa18.08■□□□□ 0.48
CD9-209ENST00000540891 ZFP37Q9Y6Q3 630 aaPredicted RBP18.08■□□□□ 0.48
CD9-209ENST00000540891 MYO10Q9HD67 2058 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 LRRN2O75325 713 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 ASS1P00966 412 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms