RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 CHURC1-FNTBB4DL54 471 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 HAPLN1P10915 354 aaPredicted RBP17.53■□□□□ 0.4
TRIM65-203ENST00000540812 FNTBP49356 437 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 LRRC32Q14392 662 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 PPP2R5DQ14738 602 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 VEPH1Q14D04 833 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 PON2Q15165 354 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 ARHGAP29Q52LW3 1261 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 SCARA3Q6AZY7 606 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 SPEM1Q8N4L4 309 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 GPR161Q8N6U8 529 aaKnown RBP17.53■□□□□ 0.4
TRIM65-203ENST00000540812 CLIC6Q96NY7 704 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 SLC46A2Q9BY10 475 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 TMLHEQ9NVH6 421 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 ABI2Q9NYB9 513 aaPredicted RBP17.53■□□□□ 0.4
TRIM65-203ENST00000540812 TBC1D7Q9P0N9 293 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 FBXO2Q9UK22 296 aaPredicted RBP17.53■□□□□ 0.4
TRIM65-203ENST00000540812 GMEB2Q9UKD1 530 aa17.53■□□□□ 0.4
TRIM65-203ENST00000540812 NUP210Q8TEM1 1887 aaPredicted RBP17.52■□□□□ 0.4
TRIM65-203ENST00000540812 K7ESF4 209 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 WEE1P30291 646 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 CDC25CP30307 473 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 GPR15P49685 360 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 ATXN1P54253 815 aaKnown RBP17.52■□□□□ 0.4
TRIM65-203ENST00000540812 POU5F1Q01860 360 aaKnown RBP17.52■□□□□ 0.4
TRIM65-203ENST00000540812 SRSF5Q13243 272 aaKnown RBP17.52■□□□□ 0.4
TRIM65-203ENST00000540812 FAM173BQ6P4H8 233 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 C1orf228Q6PIY5 440 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 PRR23BQ6ZRT6 265 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 TMEM150AQ86TG1 271 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 RALGPS2Q86X27 583 aaPredicted RBP17.52■□□□□ 0.4
TRIM65-203ENST00000540812 THEM5Q8N1Q8 247 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 CELF5Q8N6W0 485 aaKnown RBP17.52■□□□□ 0.4
TRIM65-203ENST00000540812 STKLD1Q8NE28 680 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 BPIFB1Q8TDL5 484 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 C2orf15Q8WU43 125 aaKnown RBP17.52■□□□□ 0.4
TRIM65-203ENST00000540812 HVCN1Q96D96 273 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 DNAJC19Q96DA6 116 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 SAAL1Q96ER3 474 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 FAM213AQ9BRX8 229 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 MRPL44Q9H9J2 332 aaKnown RBP17.52■□□□□ 0.4
TRIM65-203ENST00000540812 STK17AQ9UEE5 414 aa17.52■□□□□ 0.4
TRIM65-203ENST00000540812 KPNA7A9QM74 516 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 TULP1O00294 542 aaPredicted RBP17.51■□□□□ 0.39
TRIM65-203ENST00000540812 HRO43593 1189 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 IL18RAPO95256 599 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 HMGA1P17096 107 aaKnown RBP17.51■□□□□ 0.39
TRIM65-203ENST00000540812 POLR2BP30876 1174 aaKnown RBP17.51■□□□□ 0.39
TRIM65-203ENST00000540812 CASP5P51878 434 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 SPEM2Q0P670 501 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 CUL4AQ13619 759 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 POSTNQ15063 836 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 TAF12Q16514 161 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 SV2CQ496J9 727 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 RRAGBQ5VZM2 374 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 SPPL2BQ8TCT7 592 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 ZNF560Q96MR9 790 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 GCNAQ96QF7 691 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 FGFBP2Q9BYJ0 223 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 CCDC39Q9UFE4 941 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 RAB23Q9ULC3 237 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 CCL26Q9Y258 94 aa17.51■□□□□ 0.39
TRIM65-203ENST00000540812 SRPRBQ9Y5M8 271 aaKnown RBP17.51■□□□□ 0.39
TRIM65-203ENST00000540812 TPRP12270 2363 aaKnown RBP17.5■□□□□ 0.39
TRIM65-203ENST00000540812 PAPSS2O95340 614 aaPredicted RBP17.5■□□□□ 0.39
TRIM65-203ENST00000540812 TFAMQ00059 246 aaKnown RBP17.5■□□□□ 0.39
TRIM65-203ENST00000540812 PLCB2Q00722 1185 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 LMNB2Q03252 620 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 SMARCB1Q12824 385 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 RESTQ13127 1097 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 CCINQ13939 588 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 SIM2Q14190 667 aaPredicted RBP17.5■□□□□ 0.39
TRIM65-203ENST00000540812 DGKKQ5KSL6 1271 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 L1TD1Q5T7N2 865 aaKnown RBP17.5■□□□□ 0.39
TRIM65-203ENST00000540812 SDHAF4Q5VUM1 108 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 HEATR6Q6AI08 1181 aaKnown RBP17.5■□□□□ 0.39
TRIM65-203ENST00000540812 LAIR1Q6GTX8 287 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 SV2BQ7L1I2 683 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 NT5DC4Q86YG4 428 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 BRSK2Q8IWQ3 736 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 DCP1BQ8IZD4 617 aaKnown RBP17.5■□□□□ 0.39
TRIM65-203ENST00000540812 CMTM8Q8IZV2 173 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 PDCL2Q8N4E4 241 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 ACCSQ96QU6 501 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 PI4K2AQ9BTU6 479 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 SEL1LQ9UBV2 794 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 L1RE1Q9UN81 338 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 AGAP1Q9UPQ3 857 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 PCDHB5Q9Y5E4 795 aa17.5■□□□□ 0.39
TRIM65-203ENST00000540812 TCHHQ07283 1943 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 GOLGA8IPA6NC78 632 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 GOLGA8JA6NMD2 632 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 PRR5-ARHGAP8B1AHC4 643 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 GCNT3O95395 438 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 F11P03951 625 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 ITGB3P05106 788 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 GAP43P17677 238 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 NLRP12P59046 1061 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 ARHGAP8P85298 464 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 CEBPZQ03701 1054 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms