RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 SLC38A8A6NNN8 435 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 PPP6R2O75170 966 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 PAX3P23760 479 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 CCNE1P24864 410 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 MTAPQ13126 283 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 WDR44Q5JSH3 913 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 GPD1LQ8N335 351 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 DEPDC1BQ8WUY9 529 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 FAM3CQ92520 227 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 SNX21Q969T3 373 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 ZNF560Q96MR9 790 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 ZNF396Q96N95 335 aaPredicted RBP15.59■□□□□ 0.09
MSRB3-209ENST00000540804 TRIM9Q9C026 710 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 GPR88Q9GZN0 384 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 BLZF1Q9H2G9 400 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 DDX43Q9NXZ2 648 aaKnown RBP15.59■□□□□ 0.09
MSRB3-209ENST00000540804 ASB3Q9Y575 518 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 COL4A2P08572 1712 aa15.59■□□□□ 0.09
MSRB3-209ENST00000540804 CUTAO60888 179 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 LDHAP00338 332 aaKnown RBP15.58■□□□□ 0.08
MSRB3-209ENST00000540804 HOXC13P31276 330 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 TUFMP49411 452 aaKnown RBP15.58■□□□□ 0.08
MSRB3-209ENST00000540804 ASIC1P78348 528 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 DDR2Q16832 855 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 TXNDC11Q6PKC3 985 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 TMEM150AQ86TG1 271 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 ITIH5Q86UX2 942 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 NT5DC4Q86YG4 428 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 NELFCDQ8IXH7 590 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 YAF2Q8IY57 180 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 RDH13Q8NBN7 331 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 CHAMP1Q96JM3 812 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 NELL2Q99435 816 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 SLC46A2Q9BY10 475 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 TNMDQ9H2S6 317 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 TMEM206Q9H813 350 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 LMAN1LQ9HAT1 526 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 RBM12Q9NTZ6 932 aaKnown RBP15.58■□□□□ 0.08
MSRB3-209ENST00000540804 GTSE1Q9NYZ3 720 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 SNX9Q9Y5X1 595 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 SCN1AP35498 2009 aa15.58■□□□□ 0.08
MSRB3-209ENST00000540804 CLIC2O15247 247 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 ATP2C2O75185 946 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 PRPF40AO75400 957 aaKnown RBP15.57■□□□□ 0.08
MSRB3-209ENST00000540804 YEATS4O95619 227 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 ZSCAN22P10073 491 aaPredicted RBP15.57■□□□□ 0.08
MSRB3-209ENST00000540804 HMGA1P17096 107 aaKnown RBP15.57■□□□□ 0.08
MSRB3-209ENST00000540804 CYP2F1P24903 491 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 TNK2Q07912 1038 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 ALCAMQ13740 583 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 GAS6Q14393 721 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 VEPH1Q14D04 833 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 EPM2AIP1Q7L775 607 aaPredicted RBP15.57■□□□□ 0.08
MSRB3-209ENST00000540804 GRAMD1CQ8IYS0 662 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 DCP1BQ8IZD4 617 aaKnown RBP15.57■□□□□ 0.08
MSRB3-209ENST00000540804 SUMF1Q8NBK3 374 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 RIN3Q8TB24 985 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 SPPL2BQ8TCT7 592 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 CACTINQ8WUQ7 758 aaKnown RBP15.57■□□□□ 0.08
MSRB3-209ENST00000540804 PKMYT1Q99640 499 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 TRPV5Q9NQA5 729 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 HSPBP1Q9NZL4 362 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 HSFX1Q9UBD0 423 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 GTF3C4Q9UKN8 822 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 FBXO4Q9UKT5 387 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 PCDHA7Q9UN72 937 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 MAGED2Q9UNF1 606 aaPredicted RBP15.57■□□□□ 0.08
MSRB3-209ENST00000540804 MRPS17Q9Y2R5 130 aaKnown RBP15.57■□□□□ 0.08
MSRB3-209ENST00000540804 PCDHB5Q9Y5E4 795 aa15.57■□□□□ 0.08
MSRB3-209ENST00000540804 MAN2B1O00754 1011 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 DPYSL4O14531 572 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 CHADO15335 359 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 NCAM2O15394 837 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 POLR2DO15514 142 aaKnown RBP15.56■□□□□ 0.08
MSRB3-209ENST00000540804 TGFB1I1O43294 461 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 HUS1O60921 280 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 F13A1P00488 732 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 F11P03951 625 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 TMEM191BP0C7N4 346 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 CHRNB1P11230 501 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 PNPLA4P41247 253 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 RPS9P46781 194 aaKnown RBP15.56■□□□□ 0.08
MSRB3-209ENST00000540804 KPNA1P52294 538 aaPredicted RBP15.56■□□□□ 0.08
MSRB3-209ENST00000540804 RBP5P82980 135 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 FCHO2Q0JRZ9 810 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 TAF12Q16514 161 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 SOWAHAQ2M3V2 549 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 ARHGAP15Q53QZ3 475 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 INTS6LQ5JSJ4 861 aaKnown RBP15.56■□□□□ 0.08
MSRB3-209ENST00000540804 TXNDC8Q6A555 127 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 KIAA2013Q8IYS2 634 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 ADGRF2Q8IZF7 708 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 LRRC52Q8N7C0 313 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 ZNF507Q8TCN5 953 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 CSGALNACT1Q8TDX6 532 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 TASP1Q9H6P5 420 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 INTS13Q9NVM9 706 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 ITGA11Q9UKX5 1188 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 CCL26Q9Y258 94 aa15.56■□□□□ 0.08
MSRB3-209ENST00000540804 MYBPHLA2RUH7 354 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms