RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SDCBP2Q9H190 292 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 HSD3B7Q9H2F3 369 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 AFF4Q9UHB7 1163 aaKnown RBP16.57■□□□□ 0.24
DDB1-218ENST00000540784 CDH9Q9ULB4 789 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 MAFFQ9ULX9 164 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 COG5Q9UP83 839 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 WDR27A2RRH5 827 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 GTPBP10A4D1E9 387 aaKnown RBP16.56■□□□□ 0.24
DDB1-218ENST00000540784 GOLGA6L19H0YKK7 550 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 GLP2RO95838 553 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 ATF2P15336 505 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 HOXB8P17481 243 aaPredicted RBP16.56■□□□□ 0.24
DDB1-218ENST00000540784 LTBRP36941 435 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 SMARCB1Q12824 385 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 EXOC3L4Q17RC7 722 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 SLC39A12Q504Y0 691 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 ANKRD54Q6NXT1 300 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 RNF19BQ6ZMZ0 732 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 LUZP1Q86V48 1076 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 LRRTM3Q86VH5 581 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 TTC39CQ8N584 583 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 BCO2Q9BYV7 579 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 DNAI2Q9GZS0 605 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 UBE2ZQ9H832 354 aaPredicted RBP16.56■□□□□ 0.24
DDB1-218ENST00000540784 MAN1C1Q9NR34 630 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 DZANK1Q9NVP4 752 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 CLEC1BQ9P126 229 aa16.56■□□□□ 0.24
DDB1-218ENST00000540784 BARX2Q9UMQ3 279 aaPredicted RBP16.56■□□□□ 0.24
DDB1-218ENST00000540784 PRRG1O14668 218 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 HCRTO43612 131 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 ATP2C2O75185 946 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 SLC9A1P19634 815 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 KCNA5P22460 613 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 TBXAS1P24557 533 aaPredicted RBP16.55■□□□□ 0.24
DDB1-218ENST00000540784 COPB1P53618 953 aaKnown RBP16.55■□□□□ 0.24
DDB1-218ENST00000540784 ZNF445P59923 1031 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 DLX2Q07687 328 aaPredicted RBP16.55■□□□□ 0.24
DDB1-218ENST00000540784 ADCY1Q08828 1119 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 CUL2Q13617 745 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 NFE2Q16621 373 aaPredicted RBP16.55■□□□□ 0.24
DDB1-218ENST00000540784 UVSSAQ2YD98 709 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 INTS6LQ5JSJ4 861 aaKnown RBP16.55■□□□□ 0.24
DDB1-218ENST00000540784 FKBP15Q5T1M5 1219 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 LIN9Q5TKA1 542 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 CCDC149Q6ZUS6 474 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 RTL10Q7L3V2 364 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 UNC93AQ86WB7 457 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 FAM200AQ8TCP9 573 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 PGLYRP2Q96PD5 576 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 CYP4F11Q9HBI6 524 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 GCNT4Q9P109 453 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 FBXW11Q9UKB1 542 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 GTF3C4Q9UKN8 822 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 VWA8A3KMH1 1905 aa16.55■□□□□ 0.24
DDB1-218ENST00000540784 MYBPHLA2RUH7 354 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 ATP1A3P13637 1013 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 PTPN1P18031 435 aaKnown RBP16.54■□□□□ 0.24
DDB1-218ENST00000540784 CD58P19256 250 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 TRIM21P19474 475 aaKnown RBP16.54■□□□□ 0.24
DDB1-218ENST00000540784 PON1P27169 355 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 NDST1P52848 882 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 YWHAEP62258 255 aaKnown RBP16.54■□□□□ 0.24
DDB1-218ENST00000540784 DUSP4Q13115 394 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 MAPRE1Q15691 268 aaKnown RBP16.54■□□□□ 0.24
DDB1-218ENST00000540784 PPM1LQ5SGD2 360 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 FAM171BQ6P995 826 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 TCEAL8Q8IYN2 117 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 C12orf76Q8N812 135 aaPredicted RBP16.54■□□□□ 0.24
DDB1-218ENST00000540784 C2orf15Q8WU43 125 aaKnown RBP16.54■□□□□ 0.24
DDB1-218ENST00000540784 TNIP3Q96KP6 325 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 SYT15Q9BQS2 421 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 FAM124BQ9H5Z6 455 aaPredicted RBP16.54■□□□□ 0.24
DDB1-218ENST00000540784 UBE2TQ9NPD8 197 aaPredicted RBP16.54■□□□□ 0.24
DDB1-218ENST00000540784 CISHQ9NSE2 258 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 SLC27A5Q9Y2P5 690 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 PCDHB5Q9Y5E4 795 aa16.54■□□□□ 0.24
DDB1-218ENST00000540784 CCDC195A0A1B0GUA6 201 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 H3BQ06 376 aaPredicted RBP16.53■□□□□ 0.24
DDB1-218ENST00000540784 TBX10O75333 385 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 ZMYND10O75800 440 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 SEC24AO95486 1093 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 C8AP07357 584 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 PSMC1P62191 440 aaKnown RBP16.53■□□□□ 0.24
DDB1-218ENST00000540784 INCA1Q0VD86 236 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 FILIP1LQ4L180 1135 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 PHLDB3Q6NSJ2 640 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 SYCE2Q6PIF2 218 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 TRIM65Q6PJ69 517 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 RRAGAQ7L523 313 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 CRYBG2Q8N1P7 616 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 ATAD1Q8NBU5 361 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 MYCBPAPQ8TBZ2 947 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 MSLNLQ96KJ4 702 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 FAM81BQ96LP2 452 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 ANP32EQ9BTT0 268 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 APOL5Q9BWW9 433 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 NT5C1AQ9BXI3 368 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 SFXN1Q9H9B4 322 aa16.53■□□□□ 0.24
DDB1-218ENST00000540784 PRDM6Q9NQX0 595 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms