RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 DPYSL4O14531 572 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 AXIN1O15169 862 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 OGTO15294 1046 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 KCNK5O95279 499 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 F11P03951 625 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 PROS1P07225 676 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 CHRM1P11229 460 aaPredicted RBP7.92□□□□□ -1.14
YBX3-209ENST00000540747 ODC1P11926 461 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 CDC25CP30307 473 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 MPLP40238 635 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 PXNP49023 591 aaPredicted RBP7.92□□□□□ -1.14
YBX3-209ENST00000540747 PPP2R3AQ06190 1150 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 STRN3Q13033 797 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 KYAT1Q16773 422 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 AASDHQ4L235 1098 aaPredicted RBP7.92□□□□□ -1.14
YBX3-209ENST00000540747 ARHGAP15Q53QZ3 475 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 C9orf57Q5W0N0 161 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 KRT79Q5XKE5 535 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 NAIF1Q69YI7 327 aaPredicted RBP7.92□□□□□ -1.14
YBX3-209ENST00000540747 IL31Q6EBC2 164 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 JADE1Q6IE81 842 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 DSTYKQ6XUX3 929 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 HAUS6Q7Z4H7 955 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 USP37Q86T82 979 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 ITIH5Q86UX2 942 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 LRRTM3Q86VH5 581 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 CCDC83Q8IWF9 413 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 CMTM8Q8IZV2 173 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 USP13Q92995 863 aaPredicted RBP7.92□□□□□ -1.14
YBX3-209ENST00000540747 RAB34Q9BZG1 259 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 SMG9Q9H0W8 520 aaKnown RBP7.92□□□□□ -1.14
YBX3-209ENST00000540747 DUSP15Q9H1R2 295 aaPredicted RBP7.92□□□□□ -1.14
YBX3-209ENST00000540747 SMOC1Q9H4F8 434 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 FBRSL1Q9HCM7 1045 aaKnown RBP7.92□□□□□ -1.14
YBX3-209ENST00000540747 GKN1Q9NS71 199 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 KCNG1Q9UIX4 513 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 ZMYM5Q9UJ78 669 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 CPSF3Q9UKF6 684 aaKnown RBP7.92□□□□□ -1.14
YBX3-209ENST00000540747 NOL7Q9UMY1 257 aaKnown RBP7.92□□□□□ -1.14
YBX3-209ENST00000540747 LIMCH1Q9UPQ0 1083 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 NPHP3-ACAD11A0A0J9YXS1 232 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 XPOTO43592 962 aaKnown RBP7.91□□□□□ -1.14
YBX3-209ENST00000540747 RNF40O75150 1001 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 TADA3O75528 432 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 EGFP01133 1207 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 NFICP08651 508 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 HAPLN1P10915 354 aaPredicted RBP7.91□□□□□ -1.14
YBX3-209ENST00000540747 ARSAP15289 507 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 SCP2P22307 547 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 TUFMP49411 452 aaKnown RBP7.91□□□□□ -1.14
YBX3-209ENST00000540747 SMTNP53814 917 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 NLRP12P59046 1061 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 HMGN5P82970 282 aaKnown RBP7.91□□□□□ -1.14
YBX3-209ENST00000540747 ATP2C1P98194 919 aaPredicted RBP7.91□□□□□ -1.14
YBX3-209ENST00000540747 RAD51AP2Q09MP3 1159 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 RUNX3Q13761 415 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 ZNF268Q14587 947 aaPredicted RBP7.91□□□□□ -1.14
YBX3-209ENST00000540747 SLC39A12Q504Y0 691 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 TRIM68Q6AZZ1 485 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 TCEAL6Q6IPX3 200 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 CD302Q8IX05 232 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 CAMKK1Q8N5S9 505 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 C12orf50Q8NA57 414 aaPredicted RBP7.91□□□□□ -1.14
YBX3-209ENST00000540747 FAM200AQ8TCP9 573 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 C2orf15Q8WU43 125 aaKnown RBP7.91□□□□□ -1.14
YBX3-209ENST00000540747 TCEAL3Q969E4 200 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 PKMYT1Q99640 499 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 VPS45Q9NRW7 570 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 EBF1Q9UH73 591 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 RALYQ9UKM9 306 aaKnown RBP7.91□□□□□ -1.14
YBX3-209ENST00000540747 DERAQ9Y315 318 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 STYXL1Q9Y6J8 313 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 KIAA1549LQ6ZVL6 1849 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 OBSL1O75147 1896 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 DENND4CQ5VZ89 1909 aa7.91□□□□□ -1.14
YBX3-209ENST00000540747 LAMA5O15230 3695 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 ANK1P16157 1881 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 BCLAF3A2AJT9 711 aaKnown RBP7.9□□□□□ -1.14
YBX3-209ENST00000540747 H0YCG3 227 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 HNRNPDLO14979 420 aaKnown RBP7.9□□□□□ -1.14
YBX3-209ENST00000540747 ATG13O75143 517 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 PLA2G4BP0C869 781 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 DRD1P21728 446 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 DDX6P26196 483 aaKnown RBP eCLIP7.9□□□□□ -1.14
YBX3-209ENST00000540747 NMT1P30419 496 aaKnown RBP7.9□□□□□ -1.14
YBX3-209ENST00000540747 GJA4P35212 333 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 POU5F1Q01860 360 aaKnown RBP7.9□□□□□ -1.14
YBX3-209ENST00000540747 SMARCB1Q12824 385 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 GRSF1Q12849 480 aaKnown RBP eCLIP7.9□□□□□ -1.14
YBX3-209ENST00000540747 USP4Q13107 963 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 VEPH1Q14D04 833 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 PTPAQ15257 358 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 ZNF77Q15935 545 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 ARMCX5Q6P1M9 558 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 DTHD1Q6ZMT9 781 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 SYT13Q7L8C5 426 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 MON1AQ86VX9 555 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 KDF1Q8NAX2 398 aaPredicted RBP7.9□□□□□ -1.14
YBX3-209ENST00000540747 CXorf38Q8TB03 319 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 SPPL2BQ8TCT7 592 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms