RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 PPM1DO15297 605 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 URI1O94763 535 aaPredicted RBP4.68□□□□□ -1.66
MDM2-227ENST00000540709 TYRP14679 529 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 ZFXP17010 805 aaPredicted RBP4.68□□□□□ -1.66
MDM2-227ENST00000540709 GCLCP48506 637 aaPredicted RBP4.68□□□□□ -1.66
MDM2-227ENST00000540709 ANAPC15P60006 121 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 VPS53Q5VIR6 699 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 LAYNQ6UX15 382 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 TMEM108Q6UXF1 575 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 PRR18Q8N4B5 295 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 BRIX1Q8TDN6 353 aaKnown RBP4.68□□□□□ -1.66
MDM2-227ENST00000540709 FAM136AQ96C01 138 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 HOOK2Q96ED9 719 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 MVB12AQ96EY5 273 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 WNT6Q9Y6F9 365 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 PCSK5Q92824 1860 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 SPATA31A3Q5VYP0 1347 aa4.68□□□□□ -1.66
MDM2-227ENST00000540709 RBMXL2O75526 392 aaKnown RBP4.67□□□□□ -1.66
MDM2-227ENST00000540709 CDK4P11802 303 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 NDUFB7P17568 137 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 HDCP19113 662 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 NEK2P51955 445 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 PLS1Q14651 629 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 KHDC1LQ5JSQ8 128 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 IFIT1BQ5T764 474 aaKnown RBP4.67□□□□□ -1.66
MDM2-227ENST00000540709 ZNF788Q6ZQV5 615 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 TMPRSS9Q7Z410 1059 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 DDB2Q92466 427 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 SLC35A4Q96G79 324 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 GPATCH3Q96I76 525 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 PBKQ96KB5 322 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 LRGUKQ96M69 825 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 SLC46A1Q96NT5 459 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 MAP3K14Q99558 947 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 SLC29A3Q9BZD2 475 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 SARS2Q9NP81 518 aaKnown RBP4.67□□□□□ -1.66
MDM2-227ENST00000540709 EHD3Q9NZN3 535 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 ZDHHC8Q9ULC8 765 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 PADI4Q9UM07 663 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 FRMD4BQ9Y2L6 1034 aa4.67□□□□□ -1.66
MDM2-227ENST00000540709 NOP58Q9Y2X3 529 aaKnown RBP4.67□□□□□ -1.66
MDM2-227ENST00000540709 hCG_2014768A0A024R1R8 64 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 SOAT2O75908 522 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 ALDH9A1P49189 494 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 CCT8P50990 548 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 SOX8P57073 446 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 BMPR2Q13873 1038 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 BOP1Q14137 746 aaKnown RBP4.66□□□□□ -1.66
MDM2-227ENST00000540709 AMOTQ4VCS5 1084 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 PLAC9Q5JTB6 97 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 COLEC12Q5KU26 742 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 FAM160B1Q5W0V3 765 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.66□□□□□ -1.66
MDM2-227ENST00000540709 CELF5Q8N6W0 485 aaKnown RBP4.66□□□□□ -1.66
MDM2-227ENST00000540709 DDX17Q92841 729 aaKnown RBP4.66□□□□□ -1.66
MDM2-227ENST00000540709 SARAFQ96BY9 339 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 CDK5RAP3Q96JB5 506 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 TIMP4Q99727 224 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 ALG8Q9BVK2 526 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 ARHGEF3Q9NR81 526 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 SERTAD3Q9UJW9 196 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 CCNL1Q9UK58 526 aaPredicted RBP4.66□□□□□ -1.66
MDM2-227ENST00000540709 ANKRD6Q9Y2G4 727 aa4.66□□□□□ -1.66
MDM2-227ENST00000540709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.66□□□□□ -1.66
MDM2-227ENST00000540709 ARHGEF17Q96PE2 2063 aaPredicted RBP4.65□□□□□ -1.66
MDM2-227ENST00000540709 AP1G1O43747 822 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 PROP1O75360 226 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 UNC5CO95185 931 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 ALDH2P05091 517 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 HNRNPCP07910 306 aaKnown RBP eCLIP4.65□□□□□ -1.67
MDM2-227ENST00000540709 VCAM1P19320 739 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 TOB1P50616 345 aaPredicted RBP4.65□□□□□ -1.67
MDM2-227ENST00000540709 PDE1AP54750 535 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 ZNF267Q14586 743 aaPredicted RBP4.65□□□□□ -1.67
MDM2-227ENST00000540709 TMEM240Q5SV17 173 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 KLHDC4Q8TBB5 520 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 RFKQ969G6 155 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 MTFMTQ96DP5 389 aaKnown RBP4.65□□□□□ -1.67
MDM2-227ENST00000540709 FAM167AQ96KS9 214 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 OSBPL9Q96SU4 736 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 CGRRF1Q99675 332 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 CNNM1Q9NRU3 951 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 SH3BP4Q9P0V3 963 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 STAP2Q9UGK3 403 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 ADAM21Q9UKJ8 722 aa4.65□□□□□ -1.67
MDM2-227ENST00000540709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.65□□□□□ -1.67
MDM2-227ENST00000540709 WDR27A2RRH5 827 aa4.64□□□□□ -1.67
MDM2-227ENST00000540709 GCOM1H8Y6P7 765 aaPredicted RBP4.64□□□□□ -1.67
MDM2-227ENST00000540709 OFD1O75665 1012 aa4.64□□□□□ -1.67
MDM2-227ENST00000540709 ALDH1L1O75891 902 aa4.64□□□□□ -1.67
MDM2-227ENST00000540709 GRPP07492 148 aa4.64□□□□□ -1.67
MDM2-227ENST00000540709 FAM163BP0C2L3 166 aa4.64□□□□□ -1.67
MDM2-227ENST00000540709 PIM1P11309 404 aaPredicted RBP4.64□□□□□ -1.67
MDM2-227ENST00000540709 AKAP5P24588 427 aa4.64□□□□□ -1.67
MDM2-227ENST00000540709 ZNF134P52741 427 aa4.64□□□□□ -1.67
MDM2-227ENST00000540709 PROK1P58294 105 aa4.64□□□□□ -1.67
MDM2-227ENST00000540709 LILRA4P59901 499 aa4.64□□□□□ -1.67
MDM2-227ENST00000540709 NHLH1Q02575 133 aa4.64□□□□□ -1.67
MDM2-227ENST00000540709 LONRF3Q496Y0 759 aa4.64□□□□□ -1.67
MDM2-227ENST00000540709 ARHGAP40Q5TG30 622 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms