RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 AMFRQ9UKV5 643 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 PCDHA3Q9Y5H8 950 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 FAM47DPA6NHR8 397 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 ANKRD63C9JTQ0 380 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 GOLGA8HP0CJ92 632 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 CALM1P0DP23 149 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 CALM2P0DP24 149 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 CALM3P0DP25 149 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 MUTP22033 750 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 PTK2Q05397 1052 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 ZNF423Q2M1K9 1284 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 PLEKHG4Q58EX7 1191 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 RIPOR1Q6ZS17 1223 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 RGS9BPQ6ZS82 235 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 KSR1Q8IVT5 923 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 SYCE1Q8N0S2 351 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 STARD8Q92502 1023 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 ART4Q93070 314 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 NPHS2Q9NP85 383 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 ZBTB21Q9ULJ3 1066 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 CLEC11AQ9Y240 323 aa9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 HEMK1Q9Y5R4 338 aaPredicted RBP9.96□□□□□ -0.81
CTNNA1-243ENST00000540387 A0A1W2PRG0 241 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 USP17L5A8MUK1 530 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 SPECC1L-ADORA2AF8WAN1 911 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 TFPTP0C1Z6 253 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 CETPP11597 493 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 CYP2C9P11712 490 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 AQP4P55087 323 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 ASIC1P78348 528 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 ZNF211Q13398 564 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 MMEL1Q495T6 779 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 ANKRD20A4Q4UJ75 823 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 ARL6IP4Q66PJ3 421 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 PIK3AP1Q6ZUJ8 805 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 OTOAQ7RTW8 1153 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 ZNF571Q7Z3V5 609 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 SRBD1Q8N5C6 995 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 ACER1Q8TDN7 264 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 KLHL4Q9C0H6 718 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 NYAP2Q9P242 653 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 KANSL3Q9P2N6 904 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 MAD2L2Q9UI95 211 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 NAGPAQ9UK23 515 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 PPP2R3BQ9Y5P8 575 aa9.96□□□□□ -0.82
CTNNA1-243ENST00000540387 GOLGA8TH3BQL2 631 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 PODXLO00592 558 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 TXNDC9O14530 226 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 DDX3YO15523 660 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 XPOTO43592 962 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 MYCLP1P12525 358 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 CETN2P41208 172 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 ECE1P42892 770 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 STT3AP46977 705 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 BCAP31P51572 246 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 PLCB3Q01970 1234 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 C16orf72Q14CZ0 275 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 PPP2R5BQ15173 497 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 SUPT20HL1Q3ZLR7 823 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 TMEM63BQ5T3F8 832 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 DCAF15Q66K64 600 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 FBXL19Q6PCT2 694 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 PANX3Q96QZ0 392 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 HGH1Q9BTY7 390 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 CENPOQ9BU64 300 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 GLIS2Q9BZE0 524 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 TRIM9Q9C026 710 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 CPVLQ9H3G5 476 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 GRID1Q9ULK0 1009 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 NAALADL1Q9UQQ1 740 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 TTLL3Q9Y4R7 772 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 POLR2AP24928 1970 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 SPAG7O75391 227 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 DGKIO75912 1065 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 RARBP10826 455 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 ESRRAP11474 423 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 VEGFAP15692 232 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 TKTP29401 623 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 ENTPD1P49961 510 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 VCPP55072 806 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 IGBP1P78318 339 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 BTKQ06187 659 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 FUT2Q10981 343 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 GRM4Q14833 912 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 PDK4Q16654 411 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 MAP1SQ66K74 1059 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 FAAH2Q6GMR7 532 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 SNRNP48Q6IEG0 339 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 ALKBH5Q6P6C2 394 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 ISLR2Q6UXK2 745 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 NET1Q7Z628 596 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 ANKRD35Q8N283 1001 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 ZNF713Q8N859 430 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 C4orf32Q8N8J7 132 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 PYROXD1Q8WU10 500 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 NACC2Q96BF6 587 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 CCDC127Q96BQ5 260 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 PRR11Q96HE9 360 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 NSMCE3Q96MG7 304 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 WRNIP1Q96S55 665 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms