RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 PTENP60484 403 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 MESDQ14696 234 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 C1orf146Q5VVC0 180 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 DEFB123Q8N688 67 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 GSDMBQ8TAX9 411 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 BAP1Q92560 729 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 ZMAT2Q96NC0 199 aaKnown RBP9.15□□□□□ -0.95
DDB1-217ENST00000540166 GLT8D2Q9H1C3 349 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 Q9H521 79 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 DENND2DQ9H6A0 471 aaPredicted RBP9.15□□□□□ -0.95
DDB1-217ENST00000540166 PSTPIP2Q9H939 334 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 NPHS2Q9NP85 383 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 ANAPC5Q9UJX4 755 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 NAGPAQ9UK23 515 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 SSC5DA1L4H1 1573 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 ARHGAP10A1A4S6 786 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 AFPP02771 609 aaKnown RBP9.14□□□□□ -0.95
DDB1-217ENST00000540166 ZNF543Q08ER8 600 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 MYBPC3Q14896 1274 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 GSTA3Q16772 222 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 CNPY1Q3B7I2 92 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 GLIS3Q8NEA6 775 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 PTPRN2Q92932 1015 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 GFM2Q969S9 779 aaKnown RBP9.14□□□□□ -0.95
DDB1-217ENST00000540166 RNF25Q96BH1 459 aaPredicted RBP9.14□□□□□ -0.95
DDB1-217ENST00000540166 LENG1Q96BZ8 264 aaPredicted RBP9.14□□□□□ -0.95
DDB1-217ENST00000540166 CDHR1Q96JP9 859 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 MTG1Q9BT17 334 aaPredicted RBP9.14□□□□□ -0.95
DDB1-217ENST00000540166 TRIM55Q9BYV6 548 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 MEIS1O00470 390 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 KRT36O76013 467 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 CSPG5O95196 566 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 GJB6O95452 261 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 ASGR1P07306 291 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 RPS6P62753 249 aaKnown RBP9.14□□□□□ -0.95
DDB1-217ENST00000540166 IGBP1P78318 339 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 CBX3Q13185 183 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 TRIP13Q15645 432 aaPredicted RBP9.14□□□□□ -0.95
DDB1-217ENST00000540166 KYNUQ16719 465 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 GRAMD1BQ3KR37 738 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 LIN52Q52LA3 116 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 ECHDC2Q86YB7 292 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 RDH13Q8NBN7 331 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 CCDC110Q8TBZ0 833 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 HIPK3Q9H422 1215 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 SYNPO2Q9UMS6 1093 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 ASB3Q9Y575 518 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 LRRC37AA6NMS7 1700 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 KDM3AQ9Y4C1 1321 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 NKRFO15226 690 aaKnown RBP eCLIP9.14□□□□□ -0.95
DDB1-217ENST00000540166 PHF2O75151 1096 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 PDE5AO76074 875 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 FAM13AO94988 1023 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 FGBP02675 491 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 MAGEA10P43363 369 aaPredicted RBP9.14□□□□□ -0.95
DDB1-217ENST00000540166 ACLYP53396 1101 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 CYP4A11Q02928 519 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 MPP3Q13368 585 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 QRICH1Q2TAL8 776 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 MARK2Q7KZI7 788 aaKnown RBP9.14□□□□□ -0.95
DDB1-217ENST00000540166 NLRP9Q7RTR0 991 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 SPATA33Q96N06 139 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 TIPINQ9BVW5 301 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 CCDC134Q9H6E4 229 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 GJD2Q9UKL4 321 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 LRFN2Q9ULH4 789 aa9.14□□□□□ -0.95
DDB1-217ENST00000540166 NPHP3-ACAD11A0A0J9YXS1 232 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 SLC9A1P19634 815 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 HOXA13P31271 388 aaPredicted RBP9.13□□□□□ -0.95
DDB1-217ENST00000540166 CCNFP41002 786 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 LMNB2Q03252 620 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 CETN1Q12798 172 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 TMEM259Q4ZIN3 620 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 SGO2Q562F6 1265 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 TDHQ8IZJ6 230 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 RIBC1Q8N443 379 aaPredicted RBP9.13□□□□□ -0.95
DDB1-217ENST00000540166 PIP4K2CQ8TBX8 421 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 C18orf8Q96DM3 657 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 RILPQ96NA2 401 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 NR1H4Q96RI1 486 aaPredicted RBP9.13□□□□□ -0.95
DDB1-217ENST00000540166 METTL14Q9HCE5 456 aaKnown RBP9.13□□□□□ -0.95
DDB1-217ENST00000540166 DDX18Q9NVP1 670 aaKnown RBP9.13□□□□□ -0.95
DDB1-217ENST00000540166 CLIC5Q9NZA1 410 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 POTEB3A0JP26 581 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 NDC80O14777 642 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 PSMG1O95456 288 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 LYNP07948 512 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 ARFIP2P53365 341 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 GALCP54803 685 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 DGKDQ16760 1214 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 MMEL1Q495T6 779 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 POTEBQ6S5H4 581 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 CCDC80Q76M96 950 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 MTDHQ86UE4 582 aaKnown RBP9.13□□□□□ -0.95
DDB1-217ENST00000540166 DAGLBQ8NCG7 672 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 RFFLQ8WZ73 363 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 SPATA16Q9BXB7 569 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 RPL26L1Q9UNX3 145 aaKnown RBP9.13□□□□□ -0.95
DDB1-217ENST00000540166 ZNF232Q9UNY5 417 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms