RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ANXA13P27216 316 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 GNA15P30679 374 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 CYP24A1Q07973 514 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 ITKQ08881 620 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 LRIG3Q6UXM1 1119 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 RHPN2Q8IUC4 686 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 RHOT1Q8IXI2 618 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 RNF149Q8NC42 400 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 SCFD2Q8WU76 684 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 PRPF31Q8WWY3 499 aaKnown RBP10.52□□□□□ -0.73
TRAF1-202ENST00000540010 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRAF1-202ENST00000540010 COPS5Q92905 334 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 BTBD6Q96KE9 485 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 TLR10Q9BXR5 811 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 PORCNQ9H237 461 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 TRABDQ9H4I3 376 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 RBAKQ9NYW8 714 aaPredicted RBP10.52□□□□□ -0.73
TRAF1-202ENST00000540010 SALL4Q9UJQ4 1053 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 CDH16O75309 829 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 GLRA2P23416 452 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 ADSSP30520 456 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 LRRC36Q1X8D7 754 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 MDH1BQ5I0G3 518 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 C1orf146Q5VVC0 180 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 CRLF3Q8IUI8 442 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 TRIM42Q8IWZ5 723 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 TSEN2Q8NCE0 465 aaKnown RBP10.52□□□□□ -0.73
TRAF1-202ENST00000540010 ATL2Q8NHH9 583 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 ELMO3Q96BJ8 720 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 RBM41Q96IZ5 413 aaKnown RBP10.52□□□□□ -0.73
TRAF1-202ENST00000540010 FAF1Q9UNN5 650 aaPredicted RBP10.52□□□□□ -0.73
TRAF1-202ENST00000540010 ADGRA3Q8IWK6 1321 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 DDX3XO00571 662 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 PHF2O75151 1096 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 RTN2O75298 545 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 GTF2A2P52657 109 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 RTP1P59025 263 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 HSDL1Q3SXM5 330 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 KDM7AQ6ZMT4 941 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 WDR75Q8IWA0 830 aaKnown RBP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 TAS1R2Q8TE23 839 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 RUBCNQ92622 972 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 NTPCRQ9BSD7 190 aaKnown RBP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 PI4K2AQ9BTU6 479 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 R3HDMLQ9H3Y0 253 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 Q9H521 79 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 SUFUQ9UMX1 484 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 EXTL3O43909 919 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 CELF2O95319 508 aaKnown RBP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 LDHAP00338 332 aaKnown RBP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 JAM2P57087 298 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 DNAJC3Q13217 504 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 EXOC8Q8IYI6 725 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 EPS8L3Q8TE67 593 aaKnown RBP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 ABTB1Q969K4 478 aaPredicted RBP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 C18orf8Q96DM3 657 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 CALR3Q96L12 384 aaKnown RBP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 NPHS2Q9NP85 383 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 MARCOQ9UEW3 520 aaPredicted RBP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 AKT3Q9Y243 479 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 KDSRQ06136 332 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 DRP2Q13474 957 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 TFDP1Q14186 410 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 MAPK6Q16659 721 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 P3H1Q32P28 736 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 SEZ6Q53EL9 994 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 CELF3Q5SZQ8 465 aaKnown RBP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 CREG2Q8IUH2 290 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 AGR3Q8TD06 166 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 KAT5Q92993 513 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 ZBTB45Q96K62 511 aaPredicted RBP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 SMARCAD1Q9H4L7 1026 aa10.51□□□□□ -0.73
TRAF1-202ENST00000540010 GBA2Q9HCG7 927 aaPredicted RBP10.51□□□□□ -0.73
TRAF1-202ENST00000540010 IGF2BP3O00425 579 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRAF1-202ENST00000540010 ATP4AP20648 1035 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 NOP14P78316 857 aaKnown RBP10.5□□□□□ -0.73
TRAF1-202ENST00000540010 CAV1Q03135 178 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 AGBL2Q5U5Z8 902 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 SV2AQ7L0J3 742 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 TMC2Q8TDI7 906 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 GTF3C2Q8WUA4 911 aaPredicted RBP10.5□□□□□ -0.73
TRAF1-202ENST00000540010 ATG4AQ8WYN0 398 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 MIS12Q9H081 205 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 DHX33Q9H6R0 707 aaKnown RBP10.5□□□□□ -0.73
TRAF1-202ENST00000540010 SUCLA2Q9P2R7 463 aaPredicted RBP10.5□□□□□ -0.73
TRAF1-202ENST00000540010 LPXNO60711 386 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 CNMDO75829 334 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 ATP5HO75947 161 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 ARIH2O95376 493 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 PRLRP16471 622 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 GARSP41250 739 aaKnown RBP10.5□□□□□ -0.73
TRAF1-202ENST00000540010 IER5Q5VY09 327 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 ARMCX2Q7L311 632 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 SLC20A1Q8WUM9 679 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 DEPDC1BQ8WUY9 529 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 NSMCE1Q8WV22 266 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 TRAPPC12Q8WVT3 735 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 FAM84AQ96KN4 292 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 TRAIPQ9BWF2 469 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms