RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 ARSJQ5FYB0 599 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 XKR4Q5GH76 650 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 DCAF17Q5H9S7 520 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 ZBTB41Q5SVQ8 909 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 FAM171A1Q5VUB5 890 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 SPATA1Q5VX52 437 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 FOXR2Q6PJQ5 311 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 CRELD2Q6UXH1 353 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 FRMD5Q7Z6J6 570 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 FILIP1Q7Z7B0 1213 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 VPS52Q8N1B4 723 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 THEM5Q8N1Q8 247 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 SLC39A11Q8N1S5 342 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 MICALL1Q8N3F8 863 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 GSTCDQ8NEC7 633 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 POF1BQ8WVV4 589 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 C18orf25Q96B23 403 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 MRPL38Q96DV4 380 aaKnown RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 MFSD14AQ96MC6 490 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 FBXL18Q96ME1 805 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 TCF25Q9BQ70 676 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 HINFPQ9BQA5 517 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 SRRTQ9BXP5 876 aaKnown RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 OXCT2Q9BYC2 517 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 HAPLN2Q9GZV7 340 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 IKZF4Q9H2S9 585 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 RNF19AQ9NV58 838 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 DMAC2Q9NW81 257 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 DSEQ9UL01 958 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 AGAP1Q9UPQ3 857 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 PCDHGC4Q9Y5F7 938 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 TRIP12Q14669 1992 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-212ENST00000539975 GOLGA6L19H0YKK7 550 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 TMEM189-UBE2V1I3L0A0 370 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 PES1O00541 588 aaKnown RBP6.96□□□□□ -1.3
SNHG1-212ENST00000539975 C2CD2LO14523 706 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 FAM189A1O60320 539 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 N4BP1O75113 896 aaKnown RBP6.96□□□□□ -1.3
SNHG1-212ENST00000539975 SOD2P04179 222 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 ITGB3P05106 788 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 ITGB1P05556 798 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 ADRB2P07550 413 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 THBS1P07996 1170 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 NFICP08651 508 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 ODC1P11926 461 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 LRPAP1P30533 357 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 ATICP31939 592 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 GTF2H1P32780 548 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 MTIF2P46199 727 aaKnown RBP6.96□□□□□ -1.3
SNHG1-212ENST00000539975 GLUD2P49448 558 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 TNNC1P63316 161 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 ENPEPQ07075 957 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 BFSP1Q12934 665 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 UBAP2LQ14157 1087 aaKnown RBP6.96□□□□□ -1.3
SNHG1-212ENST00000539975 NFKBIBQ15653 356 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 ZBTB6Q15916 424 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 SGSM1Q2NKQ1 1148 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 SAMD5Q5TGI4 173 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 C9orf57Q5W0N0 161 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 KRT39Q6A163 491 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 FUT10Q6P4F1 479 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 EP400NLQ6ZTU2 488 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 ANKS3Q6ZW76 656 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 Q7L0L9 218 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 PPFIBP1Q86W92 1011 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 LRRC52Q8N7C0 313 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 SPPL3Q8TCT6 385 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 PARD3BQ8TEW8 1205 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 HASPINQ8TF76 798 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 GDPD5Q8WTR4 605 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 RABGGTAQ92696 567 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 PBXIP1Q96AQ6 731 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 EEF2KMTQ96G04 330 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 ZMAT2Q96NC0 199 aaKnown RBP6.96□□□□□ -1.3
SNHG1-212ENST00000539975 MMS19Q96T76 1030 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 CDX2Q99626 313 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-212ENST00000539975 CGRRF1Q99675 332 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 TTPALQ9BTX7 342 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 MTMR12Q9C0I1 747 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 TTYH1Q9H313 450 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-212ENST00000539975 NSUN3Q9H649 340 aaKnown RBP6.96□□□□□ -1.3
SNHG1-212ENST00000539975 TLE6Q9H808 572 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 MMRN2Q9H8L6 949 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 GOLGA2P5Q9HBQ8 144 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 INTS13Q9NVM9 706 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 TUBGCP4Q9UGJ1 667 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.96□□□□□ -1.32e-26■□□□□ 8.9
SNHG1-212ENST00000539975 EVPLQ92817 2033 aa6.96□□□□□ -1.3
SNHG1-212ENST00000539975 SCN5AQ14524 2016 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 SYCE3A1L190 88 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 TRIM49BA6NDI0 452 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 KPNA7A9QM74 516 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 RFXAPO00287 272 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 SYN3O14994 580 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 GRM6O15303 877 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 AKAP3O75969 853 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 KIF4AO95239 1232 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 MX2P20592 715 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms