RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 USTQ9Y2C2 406 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 TCRBV5S1A1TA0A578 114 aa23.79■■□□□ 1.4
HOMER3-204ENST00000539827 PIRO00625 290 aa23.79■■□□□ 1.4
HOMER3-204ENST00000539827 CD4P01730 458 aa23.79■■□□□ 1.4
HOMER3-204ENST00000539827 SLC1A1P43005 524 aa23.79■■□□□ 1.4
HOMER3-204ENST00000539827 UBA3Q8TBC4 463 aa23.79■■□□□ 1.4
HOMER3-204ENST00000539827 UBE2Q2Q8WVN8 375 aa23.79■■□□□ 1.4
HOMER3-204ENST00000539827 AGO3Q9H9G7 860 aaKnown RBP23.79■■□□□ 1.4
HOMER3-204ENST00000539827 ZSCAN5CA6NGD5 496 aaPredicted RBP23.78■■□□□ 1.4
HOMER3-204ENST00000539827 MEIS3P2A8K0S8 358 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 M0QYV0 167 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 ATP8B1O43520 1251 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 CYP3A5P20815 502 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 GUCY2DQ02846 1103 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 ITGA7Q13683 1181 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 CNGA2Q16280 664 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 RNF180Q86T96 592 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 RUBCNQ92622 972 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 NAP1L3Q99457 506 aaPredicted RBP23.78■■□□□ 1.4
HOMER3-204ENST00000539827 EPB41L5Q9HCM4 733 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 ERVK-5Q9HDB9 667 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 TRMT13Q9NUP7 481 aaKnown RBP23.78■■□□□ 1.4
HOMER3-204ENST00000539827 NME7Q9Y5B8 376 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 TMEM191CA6NGB0 347 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 GOLGA8SH3BPF8 625 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 O00370 1275 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 SART1O43290 800 aaKnown RBP23.78■■□□□ 1.4
HOMER3-204ENST00000539827 XPOTO43592 962 aaKnown RBP23.78■■□□□ 1.4
HOMER3-204ENST00000539827 ATF7P17544 494 aaPredicted RBP23.78■■□□□ 1.4
HOMER3-204ENST00000539827 HTRA3P83110 453 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 KCTD19Q17RG1 926 aaPredicted RBP23.78■■□□□ 1.4
HOMER3-204ENST00000539827 RPAINQ86UA6 219 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 TTC39CQ8N584 583 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 MCEEQ96PE7 176 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 FAM105AQ9NUU6 356 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 OGFRQ9NZT2 677 aa23.78■■□□□ 1.4
HOMER3-204ENST00000539827 SPTLC1O15269 473 aa23.77■■□□□ 1.4
HOMER3-204ENST00000539827 ACLYP53396 1101 aa23.77■■□□□ 1.4
HOMER3-204ENST00000539827 TAS2R40P59535 323 aa23.77■■□□□ 1.4
HOMER3-204ENST00000539827 MAP9Q49MG5 647 aa23.77■■□□□ 1.4
HOMER3-204ENST00000539827 C12orf29Q8N999 325 aa23.77■■□□□ 1.4
HOMER3-204ENST00000539827 ZFP42Q96MM3 310 aa23.77■■□□□ 1.4
HOMER3-204ENST00000539827 CPXM1Q96SM3 734 aa23.77■■□□□ 1.4
HOMER3-204ENST00000539827 FAM53CQ9NYF3 392 aa23.77■■□□□ 1.4
HOMER3-204ENST00000539827 ESYT3A0FGR9 886 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 PTGESO14684 152 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 CD52P31358 61 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 MAP2K2P36507 400 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 SSR1P43307 286 aaKnown RBP23.76■■□□□ 1.39
HOMER3-204ENST00000539827 LLGL1Q15334 1064 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 SOWAHAQ2M3V2 549 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 FBXO47Q5MNV8 452 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 DCUN1D2Q6PH85 259 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 HDXQ7Z353 690 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 ACOT1Q86TX2 421 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 OR6B3Q8NGW1 331 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 LPPQ93052 612 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 GDAP1L1Q96MZ0 367 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 GDF3Q9NR23 364 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 IP6K2Q9UHH9 426 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 NOD1Q9Y239 953 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 GHRP10912 638 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 TNNT3P45378 269 aaPredicted RBP23.76■■□□□ 1.39
HOMER3-204ENST00000539827 IFT20Q8IY31 132 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.76■■□□□ 1.39
HOMER3-204ENST00000539827 PXYLP1Q8TE99 480 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 ZNF560Q96MR9 790 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 TSPAN18Q96SJ8 248 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 FAM124BQ9H5Z6 455 aaPredicted RBP23.76■■□□□ 1.39
HOMER3-204ENST00000539827 CHST12Q9NRB3 414 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 AMACRQ9UHK6 382 aa23.76■■□□□ 1.39
HOMER3-204ENST00000539827 TCRBV7S2A1N4TA0A589 114 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 GPR182O15218 404 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 HCRTO43612 131 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 ERBB2P04626 1255 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 INHAP05111 366 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 GJC1P36383 396 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 GPD2P43304 727 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 PSMC1P62191 440 aaKnown RBP23.75■■□□□ 1.39
HOMER3-204ENST00000539827 OGDHQ02218 1023 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 PPP1R15BQ5SWA1 713 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 C3orf20Q8ND61 904 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 CASKIN2Q8WXE0 1202 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 C18orf8Q96DM3 657 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 LPIN3Q9BQK8 851 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 SYNCQ9H7C4 482 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 TSPAN16Q9UKR8 245 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 KIAA1257Q9ULG3 409 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 STRIP2Q9ULQ0 834 aa23.75■■□□□ 1.39
HOMER3-204ENST00000539827 KPNA7A9QM74 516 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 MAP2K7O14733 419 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 IBSPP21815 317 aaPredicted RBP23.74■■□□□ 1.39
HOMER3-204ENST00000539827 PLA2G4AP47712 749 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 TAF6P49848 677 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 ZNF252P-AS1Q0IIN9 211 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 TRADDQ15628 312 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 CLUL1Q15846 466 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 GOLGA7BQ2TAP0 167 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 SLC13A5Q86YT5 568 aaPredicted RBP23.74■■□□□ 1.39
HOMER3-204ENST00000539827 ZDHHC14Q8IZN3 488 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms