RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 NOP9Q86U38 636 aaKnown RBP12.51□□□□□ -0.41
VTN-202ENST00000539746 ERICH1Q86X53 443 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 PHF13Q86YI8 300 aaPredicted RBP12.51□□□□□ -0.41
VTN-202ENST00000539746 B3GALNT2Q8NCR0 500 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 GSTCDQ8NEC7 633 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 SLC30A5Q8TAD4 765 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 GOLGA1Q92805 767 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 LPPQ93052 612 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 FUBP3Q96I24 572 aaKnown RBP eCLIP12.51□□□□□ -0.41
VTN-202ENST00000539746 SAMD11Q96NU1 681 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 UBXN6Q9BZV1 441 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 ELOVL4Q9GZR5 314 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 PNPLA8Q9NP80 782 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 LZTFL1Q9NQ48 299 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.51□□□□□ -0.41
VTN-202ENST00000539746 RNF14Q9UBS8 474 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 PYCARDQ9ULZ3 195 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 JRKLQ9Y4A0 524 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 CASTOR2A6NHX0 329 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 ZBBXA8MT70 800 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 MIF4GDA9UHW6 222 aaKnown RBP12.5□□□□□ -0.41
VTN-202ENST00000539746 GABRDO14764 452 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 LPXNO60711 386 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 DGKIO75912 1065 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 FBXO21O94952 628 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 CYP1A1P04798 512 aaPredicted RBP12.5□□□□□ -0.41
VTN-202ENST00000539746 SLC1A1P43005 524 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 RAD23BP54727 409 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 GNG11P61952 73 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 PLCB3Q01970 1234 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 GOLGA8FQ08AF8 430 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 GOLGA8DPQ0D2H9 430 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 BST2Q10589 180 aaKnown RBP12.5□□□□□ -0.41
VTN-202ENST00000539746 BTG3Q14201 252 aaPredicted RBP12.5□□□□□ -0.41
VTN-202ENST00000539746 ACAP1Q15027 740 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 SOWAHAQ2M3V2 549 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 CLLU1OSQ5K130 101 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 KIAA1841Q6NSI8 718 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 COLGALT2Q8IYK4 626 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 PDCL2Q8N4E4 241 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 ANKRD52Q8NB46 1076 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.5□□□□□ -0.41
VTN-202ENST00000539746 TMEM169Q96HH4 297 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 HSFY1Q96LI6 401 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 CASD1Q96PB1 797 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 NAP1L3Q99457 506 aaPredicted RBP12.5□□□□□ -0.41
VTN-202ENST00000539746 SMYD3Q9H7B4 428 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 ABCB6Q9NP58 842 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 TRMT1Q9NXH9 659 aaKnown RBP12.5□□□□□ -0.41
VTN-202ENST00000539746 DDX43Q9NXZ2 648 aaKnown RBP12.5□□□□□ -0.41
VTN-202ENST00000539746 ADAM22Q9P0K1 906 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 DPP7Q9UHL4 492 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 GUCA1BQ9UMX6 200 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.5□□□□□ -0.41
VTN-202ENST00000539746 SLC4A7Q9Y6M7 1214 aa12.5□□□□□ -0.41
VTN-202ENST00000539746 NCANO14594 1321 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 M0QYV0 167 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 DDX3XO00571 662 aaKnown RBP eCLIP12.49□□□□□ -0.411e-8■□□□□ 9.6
VTN-202ENST00000539746 OAZ2O95190 189 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 FAM200BP0CF97 657 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 TNNT1P13805 278 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 CSF2RAP15509 400 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 EN2P19622 333 aaPredicted RBP12.49□□□□□ -0.41
VTN-202ENST00000539746 IBSPP21815 317 aaPredicted RBP12.49□□□□□ -0.41
VTN-202ENST00000539746 GSCP56915 257 aaPredicted RBP12.49□□□□□ -0.41
VTN-202ENST00000539746 WDR5P61964 334 aaKnown RBP12.49□□□□□ -0.41
VTN-202ENST00000539746 FMO1Q01740 532 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 ZNF268Q14587 947 aaPredicted RBP12.49□□□□□ -0.41
VTN-202ENST00000539746 USP41Q3LFD5 358 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 TAF3Q5VWG9 929 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 RTN4RL1Q86UN2 441 aaPredicted RBP12.49□□□□□ -0.41
VTN-202ENST00000539746 UBL4BQ8N7F7 174 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 SLC4A11Q8NBS3 891 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 MNS1Q8NEH6 495 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 DPF3Q92784 378 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 ZNF653Q96CK0 615 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 SMARCD1Q96GM5 515 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 HNRNPABQ99729 332 aaKnown RBP12.49□□□□□ -0.41
VTN-202ENST00000539746 ARID3AQ99856 593 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 SYT15Q9BQS2 421 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 DESI2Q9BSY9 194 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 SYT11Q9BT88 431 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 CTTNBP2NLQ9P2B4 639 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 HSFX1Q9UBD0 423 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 L1RE1Q9UN81 338 aa12.49□□□□□ -0.41
VTN-202ENST00000539746 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.48□□□□□ -0.41
VTN-202ENST00000539746 TRIM43BA6NCK2 446 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 MYO1FO00160 1098 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 C1RP00736 705 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 ERBB2P04626 1255 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 MMEP08473 750 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 FGFR1P11362 822 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 UNGP13051 313 aaPredicted RBP12.48□□□□□ -0.41
VTN-202ENST00000539746 TCP1P17987 556 aaKnown RBP12.48□□□□□ -0.41
VTN-202ENST00000539746 PTPN1P18031 435 aaKnown RBP12.48□□□□□ -0.41
VTN-202ENST00000539746 MMP8P22894 467 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 CYP27A1Q02318 531 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 APBA1Q02410 837 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 MTA1Q13330 715 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 ZNF394Q53GI3 561 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms