RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SGSM1Q2NKQ1 1148 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 PUS10Q3MIT2 529 aaKnown RBP16.87■□□□□ 0.29
RPAIN-206ENST00000539417 HSP90AA4PQ58FG1 418 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 LIN9Q5TKA1 542 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 TPGS2Q68CL5 300 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 KRT39Q6A163 491 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 CES5AQ6NT32 575 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 DPH6Q7L8W6 267 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 TRIM59Q8IWR1 403 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 TCEAL8Q8IYN2 117 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 THEM5Q8N1Q8 247 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 CRTAC1Q9NQ79 661 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 ZDHHC7Q9NXF8 308 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 GTF3C4Q9UKN8 822 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 INSL5Q9Y5Q6 135 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 NOTCH4Q99466 2003 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 MYBPHLA2RUH7 354 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 PRRG1O14668 218 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 CLSTN1O94985 981 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 ASPAP45381 313 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 ZP2Q05996 745 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 ZNF667Q5HYK9 610 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 INTS6LQ5JSJ4 861 aaKnown RBP16.86■□□□□ 0.29
RPAIN-206ENST00000539417 GRASPQ7Z6J2 395 aaPredicted RBP16.86■□□□□ 0.29
RPAIN-206ENST00000539417 TATDN2Q93075 761 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 ACBD6Q9BR61 282 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 RHOBTB2Q9BYZ6 727 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 HMGXB4Q9UGU5 601 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 N4BP1O75113 896 aaKnown RBP16.86■□□□□ 0.29
RPAIN-206ENST00000539417 TACC1O75410 805 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 ELF1P32519 619 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 MARSP56192 900 aaKnown RBP16.86■□□□□ 0.29
RPAIN-206ENST00000539417 NOP14P78316 857 aaKnown RBP16.86■□□□□ 0.29
RPAIN-206ENST00000539417 TWF1Q12792 350 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 ORC1Q13415 861 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 ATAT1Q5SQI0 421 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 STKLD1Q8NE28 680 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 OR6B3Q8NGW1 331 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 CNOT6LQ96LI5 555 aaKnown RBP16.86■□□□□ 0.29
RPAIN-206ENST00000539417 UHRF1Q96T88 793 aaPredicted RBP16.86■□□□□ 0.29
RPAIN-206ENST00000539417 OXCT2Q9BYC2 517 aaPredicted RBP16.86■□□□□ 0.29
RPAIN-206ENST00000539417 METTL14Q9HCE5 456 aaKnown RBP16.86■□□□□ 0.29
RPAIN-206ENST00000539417 RAB20Q9NX57 234 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 CEP72Q9P209 647 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 DNMT3BQ9UBC3 853 aaKnown RBP16.86■□□□□ 0.29
RPAIN-206ENST00000539417 DPP7Q9UHL4 492 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 YIPF1Q9Y548 306 aa16.86■□□□□ 0.29
RPAIN-206ENST00000539417 ERCC5P28715 1186 aaPredicted RBP16.85■□□□□ 0.29
RPAIN-206ENST00000539417 HOXA9P31269 272 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 GNL1P36915 607 aaPredicted RBP16.85■□□□□ 0.29
RPAIN-206ENST00000539417 MTHFRP42898 656 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 LHX1P48742 406 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 FMO5P49326 533 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 GPR15P49685 360 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 MYL7Q01449 175 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 UVSSAQ2YD98 709 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 FAM171BQ6P995 826 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 POTEHQ6S545 545 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 CCDC149Q6ZUS6 474 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 CREBRFQ8IUR6 639 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 HS6ST3Q8IZP7 471 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 FBXL13Q8NEE6 735 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 KHSRPQ92945 711 aaKnown RBP eCLIP16.85■□□□□ 0.29
RPAIN-206ENST00000539417 RPGRIP1Q96KN7 1286 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 RIPOR3Q96MK2 946 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 ARID3AQ99856 593 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 SYT15Q9BQS2 421 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 PHF7Q9BWX1 381 aaPredicted RBP16.85■□□□□ 0.29
RPAIN-206ENST00000539417 DNAJC25Q9H1X3 360 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 SAMSN1Q9NSI8 373 aaKnown RBP16.85■□□□□ 0.29
RPAIN-206ENST00000539417 ABI2Q9NYB9 513 aaPredicted RBP16.85■□□□□ 0.29
RPAIN-206ENST00000539417 COQ4Q9Y3A0 265 aa16.85■□□□□ 0.29
RPAIN-206ENST00000539417 C19orf67A6NJJ6 358 aa16.84■□□□□ 0.29
RPAIN-206ENST00000539417 HNRNPA1P09651 372 aaKnown RBP eCLIP16.84■□□□□ 0.29
RPAIN-206ENST00000539417 KCNH2Q12809 1159 aa16.84■□□□□ 0.29
RPAIN-206ENST00000539417 SASS6Q6UVJ0 657 aa16.84■□□□□ 0.29
RPAIN-206ENST00000539417 ADHFE1Q8IWW8 467 aa16.84■□□□□ 0.29
RPAIN-206ENST00000539417 SPATA18Q8TC71 538 aa16.84■□□□□ 0.29
RPAIN-206ENST00000539417 GPR152Q8TDT2 470 aa16.84■□□□□ 0.29
RPAIN-206ENST00000539417 TAF4BQ92750 862 aa16.84■□□□□ 0.29
RPAIN-206ENST00000539417 TWNKQ96RR1 684 aa16.84■□□□□ 0.29
RPAIN-206ENST00000539417 BCO2Q9BYV7 579 aa16.84■□□□□ 0.29
RPAIN-206ENST00000539417 SNX25Q9H3E2 840 aa16.84■□□□□ 0.29
RPAIN-206ENST00000539417 PIDD1Q9HB75 910 aa16.84■□□□□ 0.29
RPAIN-206ENST00000539417 WDR6Q9NNW5 1121 aaKnown RBP16.84■□□□□ 0.29
RPAIN-206ENST00000539417 C2CD4DB7Z1M9 353 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 LOC730098B7Z3J9 87 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 STX10O60499 249 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 ATF6P18850 670 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 CYP2F1P24903 491 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 TSPY1Q01534 308 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 TYRO3Q06418 890 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 LRMPQ12912 555 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 SLC5A9Q2M3M2 681 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 KLHL40Q2TBA0 621 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 SDHAF4Q5VUM1 108 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 ELMSAN1Q6PJG2 1045 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 DCP1BQ8IZD4 617 aaKnown RBP16.83■□□□□ 0.28
RPAIN-206ENST00000539417 ST13P5Q8NFI4 369 aaPredicted RBP16.83■□□□□ 0.28
RPAIN-206ENST00000539417 LMO3Q8TAP4 145 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms