RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 TRIM72Q6ZMU5 477 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 ZNF572Q7Z3I7 529 aaPredicted RBP9.41□□□□□ -0.9
DDB1-213ENST00000539332 DNAAF5Q86Y56 855 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 RBBP8NLQ8NC74 664 aaPredicted RBP9.41□□□□□ -0.9
DDB1-213ENST00000539332 TPCN2Q8NHX9 752 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 ARHGEF26Q96DR7 871 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 ADAM2Q99965 735 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 APOL6Q9BWW8 343 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 PPP1R12CQ9BZL4 782 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 RNF39Q9H2S5 420 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 ACP6Q9NPH0 428 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 TMEM39AQ9NV64 488 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 SAR1BQ9Y6B6 198 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 TSC2P49815 1807 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 PALMO75781 387 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 FTLP02792 175 aaPredicted RBP9.4□□□□□ -0.9
DDB1-213ENST00000539332 CYP1A2P05177 515 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 TCP1P17987 556 aaKnown RBP9.4□□□□□ -0.9
DDB1-213ENST00000539332 AKAP5P24588 427 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 CYP2C18P33260 490 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 RAB27AP51159 221 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 YARSP54577 528 aaKnown RBP9.4□□□□□ -0.9
DDB1-213ENST00000539332 YWHAEP62258 255 aaKnown RBP9.4□□□□□ -0.9
DDB1-213ENST00000539332 CENPCQ03188 943 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 PLEKHG4Q58EX7 1191 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 RHOT2Q8IXI1 618 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 FAM76AQ8TAV0 307 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 COG1Q8WTW3 980 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 CTNNBL1Q8WYA6 563 aaPredicted RBP9.4□□□□□ -0.9
DDB1-213ENST00000539332 SCLYQ96I15 445 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 THAP2Q9H0W7 228 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 CXCL16Q9H2A7 254 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 GTF3C4Q9UKN8 822 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 HYOU1Q9Y4L1 999 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 PCDHB4Q9Y5E5 795 aa9.4□□□□□ -0.9
DDB1-213ENST00000539332 A0A0U1RQF3 1178 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 GOLGA8KD6RF30 607 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 CES2O00748 559 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 ZNF623O75123 536 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 PARNO95453 639 aaKnown RBP9.4□□□□□ -0.91
DDB1-213ENST00000539332 ITGB3P05106 788 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 RHOXF2BP0C7M4 288 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 KCNE1P15382 129 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 CCL23P55773 120 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 GSCP56915 257 aaPredicted RBP9.4□□□□□ -0.91
DDB1-213ENST00000539332 NOMO3P69849 1222 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 ZNF667Q5HYK9 610 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 ACAD10Q6JQN1 1059 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 PPP1R2P3Q6NXS1 205 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 TMEM270Q6UE05 265 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 MRPL10Q7Z7H8 261 aaKnown RBP9.4□□□□□ -0.91
DDB1-213ENST00000539332 RTN4RL1Q86UN2 441 aaPredicted RBP9.4□□□□□ -0.91
DDB1-213ENST00000539332 DBF4BQ8NFT6 615 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 ZMAT2Q96NC0 199 aaKnown RBP9.4□□□□□ -0.91
DDB1-213ENST00000539332 RHOXF2Q9BQY4 288 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 FTHL17Q9BXU8 183 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 CYP3A43Q9HB55 503 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 AVENQ9NQS1 362 aaPredicted RBP9.4□□□□□ -0.91
DDB1-213ENST00000539332 CISHQ9NSE2 258 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 HPCAL4Q9UM19 191 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 STXBP5LQ9Y2K9 1186 aa9.4□□□□□ -0.91
DDB1-213ENST00000539332 MEIS3P2A8K0S8 358 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 KIAA0355O15063 1070 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 KIF1CO43896 1103 aaKnown RBP9.39□□□□□ -0.91
DDB1-213ENST00000539332 OPA1O60313 960 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 CXCL10P02778 98 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 TCF3P15923 654 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 ATF7P17544 494 aaPredicted RBP9.39□□□□□ -0.91
DDB1-213ENST00000539332 GNA15P30679 374 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 POLR2BP30876 1174 aaKnown RBP9.39□□□□□ -0.91
DDB1-213ENST00000539332 CDH5P33151 784 aaPredicted RBP9.39□□□□□ -0.91
DDB1-213ENST00000539332 GPC5P78333 572 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 RBP5P82980 135 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 ITIH3Q06033 890 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 INCA1Q0VD86 236 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 C11orf63Q6NUN7 778 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 B4GALNT4Q76KP1 1039 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 CREG2Q8IUH2 290 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 HACE1Q8IYU2 909 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 SYCE1Q8N0S2 351 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 LRRC52Q8N7C0 313 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 SLC35G2Q8TBE7 412 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 LINC01599Q8WXQ3 324 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 SEPT8Q92599 483 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 KIF12Q96FN5 646 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 VCPIP1Q96JH7 1222 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 OSBPL9Q96SU4 736 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 SDCBP2Q9H190 292 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
DDB1-213ENST00000539332 RGS18Q9NS28 235 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 SEPT11Q9NVA2 429 aaKnown RBP9.39□□□□□ -0.91
DDB1-213ENST00000539332 DPP3Q9NY33 737 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 KLK14Q9P0G3 267 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 UVRAGQ9P2Y5 699 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 PARP2Q9UGN5 583 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 PCDHGC3Q9UN70 934 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 POLIQ9UNA4 740 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 COG5Q9UP83 839 aa9.39□□□□□ -0.91
DDB1-213ENST00000539332 SMIM28A0A1B0GU29 152 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 TRIM43BA6NCK2 446 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms