RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 SELENOOQ9BVL4 669 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 STK33Q9BYT3 514 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 UBA5Q9GZZ9 404 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 OBP2BQ9NPH6 170 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 A1CFQ9NQ94 594 aaKnown RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 CTTNBP2NLQ9P2B4 639 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 IGSF9Q9P2J2 1179 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 GRHPRQ9UBQ7 328 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 SLC39A10Q9ULF5 831 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 ATP11BQ9Y2G3 1177 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 USP15Q9Y4E8 981 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 CEP83Q9Y592 693 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 LGALS16A8MUM7 142 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 hCG_1984214I3L0E3 225 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 MYO1CO00159 1063 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 PODXLO00592 558 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 TRIM38O00635 465 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 THAP12O43422 761 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 TNFRSF6BO95407 300 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 A1BGP04217 495 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 THP07101 528 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 VEGFAP15692 232 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-210ENST00000539303 ACO1P21399 889 aaKnown RBP3.76□□□□□ -1.81
SNHG1-210ENST00000539303 FGFR4P22455 802 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 GABRB3P28472 473 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 FAM189BP81408 668 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 OCA2Q04671 838 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 TCF15Q12870 199 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 SURF1Q15526 300 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 CCDC38Q502W7 563 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 PDCD4Q53EL6 469 aaKnown RBP3.76□□□□□ -1.81
SNHG1-210ENST00000539303 SLC44A4Q53GD3 710 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 PLA1AQ53H76 456 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 HSP90AB4PQ58FF6 505 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 FCRL6Q6DN72 434 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 CRTC1Q6UUV9 634 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 LDHAL6AQ6ZMR3 332 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 CIR1Q86X95 450 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-210ENST00000539303 RHOT2Q8IXI1 618 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 VGLL2Q8N8G2 317 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 FANCBQ8NB91 859 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 OR56A1Q8NGH5 318 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 Q8TCH9 128 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 STYXQ8WUJ0 223 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 MUL1Q969V5 352 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 ZC3H10Q96K80 434 aaKnown RBP3.76□□□□□ -1.81
SNHG1-210ENST00000539303 TRIB1Q96RU8 372 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 NELL2Q99435 816 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 MPHOSPH9Q99550 1183 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 MNTQ99583 582 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 HEPHQ9BQS7 1158 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 MESP1Q9BRJ9 268 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 HERPUD2Q9BSE4 406 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 GPR87Q9BY21 358 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 ZNF768Q9H5H4 540 aaKnown RBP3.76□□□□□ -1.81
SNHG1-210ENST00000539303 SERHLQ9NQF3 203 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 LRFN1Q9P244 771 aa3.76□□□□□ -1.81
SNHG1-210ENST00000539303 MRPS17Q9Y2R5 130 aaKnown RBP3.76□□□□□ -1.81
SNHG1-210ENST00000539303 A0A1B0GTW7 788 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 hCG_1642624A0A1W2PR95 340 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 DBX1A6NMT0 343 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 GRXCR1A8MXD5 290 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 AHRRA9YTQ3 701 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 HMGB1P1B2RPK0 211 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-210ENST00000539303 PATE3B3GLJ2 98 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 NPC1O15118 1278 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 FFAR2O15552 330 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 SUN1O94901 812 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 CHEK2O96017 543 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 CSTBP04080 98 aaKnown RBP3.75□□□□□ -1.81
SNHG1-210ENST00000539303 BTF3P20290 206 aaKnown RBP3.75□□□□□ -1.81
SNHG1-210ENST00000539303 COMTP21964 271 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 MGAT1P26572 445 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 ACVR2AP27037 513 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 IL1R2P27930 398 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 RENBPP51606 427 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 ICA1Q05084 483 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 ICAM4Q14773 271 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 RAB30Q15771 203 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 PFKFB4Q16877 469 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 PTCHD3Q3KNS1 767 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 TMEM95Q3KNT9 176 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 CD300EQ496F6 205 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-210ENST00000539303 DCAF17Q5H9S7 520 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-210ENST00000539303 METTL24Q5JXM2 366 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 UBXN11Q5T124 520 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 RAP1GAP2Q684P5 730 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 LIN54Q6MZP7 749 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 SPOCD1Q6ZMY3 1216 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 CATSPERGQ6ZRH7 1159 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 LRRC55Q6ZSA7 311 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 POLNQ7Z5Q5 900 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 CACNA2D3Q8IZS8 1091 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 Q8NA96 180 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 DDX17Q92841 729 aaKnown RBP3.75□□□□□ -1.81
SNHG1-210ENST00000539303 SMOQ99835 787 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 ZCCHC4Q9H5U6 513 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 MSL2Q9HCI7 577 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms