RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 NECAB2Q7Z6G3 386 aa6.77□□□□□ -1.33
CCDC7-209ENST00000539197 SH2D3AQ9BRG2 576 aa6.77□□□□□ -1.33
CCDC7-209ENST00000539197 SERTAD4Q9NUC0 356 aa6.77□□□□□ -1.33
CCDC7-209ENST00000539197 CFAP97Q9P2B7 532 aa6.77□□□□□ -1.33
CCDC7-209ENST00000539197 CFAP20Q9Y6A4 193 aaKnown RBP6.77□□□□□ -1.33
CCDC7-209ENST00000539197 NDUFB7P17568 137 aa6.76□□□□□ -1.33
CCDC7-209ENST00000539197 MPGP29372 298 aa6.76□□□□□ -1.33
CCDC7-209ENST00000539197 BOP1Q14137 746 aaKnown RBP6.76□□□□□ -1.33
CCDC7-209ENST00000539197 EGFLAMQ63HQ2 1017 aa6.76□□□□□ -1.33
CCDC7-209ENST00000539197 C11orf87Q6NUJ2 197 aa6.76□□□□□ -1.33
CCDC7-209ENST00000539197 CEP85Q6P2H3 762 aa6.76□□□□□ -1.33
CCDC7-209ENST00000539197 TTC7BQ86TV6 843 aa6.76□□□□□ -1.33
CCDC7-209ENST00000539197 CNPPD1Q9BV87 410 aa6.76□□□□□ -1.33
CCDC7-209ENST00000539197 NRIP3Q9NQ35 241 aa6.76□□□□□ -1.33
CCDC7-209ENST00000539197 ATP8A1Q9Y2Q0 1164 aa6.76□□□□□ -1.33
CCDC7-209ENST00000539197 MRFAP1Q9Y605 127 aa6.76□□□□□ -1.33
CCDC7-209ENST00000539197 GABRDO14764 452 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 IKBKBO14920 756 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 NXPH3O95157 252 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 LATS1O95835 1130 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 ITGALP20701 1170 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 SMARCA1P28370 1054 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 TUBA4AP68366 448 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 SLC44A4Q53GD3 710 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 ATRIPQ8WXE1 791 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 RPL36ALQ969Q0 106 aaKnown RBP6.75□□□□□ -1.33
CCDC7-209ENST00000539197 REPS1Q96D71 796 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 ARHGEF3Q9NR81 526 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 SH3BP4Q9P0V3 963 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 PCDHA3Q9Y5H8 950 aa6.75□□□□□ -1.33
CCDC7-209ENST00000539197 ZNF213O14771 459 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 PPM1DO15297 605 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 KATNA1O75449 491 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 JTBO76095 146 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 FAM163BP0C2L3 166 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 CERS1P27544 350 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 CD6P30203 668 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 SP2Q02086 613 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 ITKQ08881 620 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 ETFDHQ16134 617 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 KLHDC4Q8TBB5 520 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 FAM136AQ96C01 138 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 FCRL4Q96PJ5 515 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 QTRT1Q9BXR0 403 aaKnown RBP6.74□□□□□ -1.33
CCDC7-209ENST00000539197 SIK2Q9H0K1 926 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 GPR35Q9HC97 309 aa6.74□□□□□ -1.33
CCDC7-209ENST00000539197 BMP15O95972 392 aa6.73□□□□□ -1.33
CCDC7-209ENST00000539197 EPHB2P29323 1055 aa6.73□□□□□ -1.33
CCDC7-209ENST00000539197 PRDX5P30044 214 aa6.73□□□□□ -1.33
CCDC7-209ENST00000539197 CDKN1CP49918 316 aaPredicted RBP6.73□□□□□ -1.33
CCDC7-209ENST00000539197 PROSER3Q2NL68 480 aa6.73□□□□□ -1.33
CCDC7-209ENST00000539197 TEDDM1Q5T9Z0 273 aa6.73□□□□□ -1.33
CCDC7-209ENST00000539197 NEK8Q86SG6 692 aa6.73□□□□□ -1.33
CCDC7-209ENST00000539197 FAM109AQ8N4B1 249 aa6.73□□□□□ -1.33
CCDC7-209ENST00000539197 ZBTB9Q96C00 473 aa6.73□□□□□ -1.33
CCDC7-209ENST00000539197 MTMR8Q96EF0 704 aa6.73□□□□□ -1.33
CCDC7-209ENST00000539197 BHMT2Q9H2M3 363 aa6.73□□□□□ -1.33
CCDC7-209ENST00000539197 BTBD3Q9Y2F9 522 aa6.73□□□□□ -1.33
CCDC7-209ENST00000539197 TISP43B9A030 160 aa6.72□□□□□ -1.33
CCDC7-209ENST00000539197 SMIM22K7EJ46 135 aa6.72□□□□□ -1.33
CCDC7-209ENST00000539197 GUCY2FP51841 1108 aa6.72□□□□□ -1.33
CCDC7-209ENST00000539197 FAM50AQ14320 339 aaKnown RBP6.72□□□□□ -1.33
CCDC7-209ENST00000539197 SUPT20HL1Q3ZLR7 823 aa6.72□□□□□ -1.33
CCDC7-209ENST00000539197 MORN5Q5VZ52 161 aa6.72□□□□□ -1.33
CCDC7-209ENST00000539197 SLC29A4Q7RTT9 530 aa6.72□□□□□ -1.33
CCDC7-209ENST00000539197 FAM90A1Q86YD7 464 aa6.72□□□□□ -1.33
CCDC7-209ENST00000539197 TBC1D5Q92609 795 aa6.72□□□□□ -1.33
CCDC7-209ENST00000539197 TINAGL1Q9GZM7 467 aaPredicted RBP6.72□□□□□ -1.33
CCDC7-209ENST00000539197 RAD54BQ9Y620 910 aa6.72□□□□□ -1.33
CCDC7-209ENST00000539197 ZRANB2O95218 330 aaKnown RBP eCLIP6.71□□□□□ -1.34
CCDC7-209ENST00000539197 IGKV2-30P06310 120 aa6.71□□□□□ -1.34
CCDC7-209ENST00000539197 CYP2D6P10635 497 aa6.71□□□□□ -1.34
CCDC7-209ENST00000539197 RARBP10826 455 aa6.71□□□□□ -1.34
CCDC7-209ENST00000539197 PIK3CGP48736 1102 aa6.71□□□□□ -1.34
CCDC7-209ENST00000539197 ALDH9A1P49189 494 aa6.71□□□□□ -1.34
CCDC7-209ENST00000539197 CLCN2P51788 898 aa6.71□□□□□ -1.34
CCDC7-209ENST00000539197 CEP78Q5JTW2 689 aa6.71□□□□□ -1.34
CCDC7-209ENST00000539197 ZNF618Q5T7W0 954 aa6.71□□□□□ -1.34
CCDC7-209ENST00000539197 SLC9A4Q6AI14 798 aa6.71□□□□□ -1.34
CCDC7-209ENST00000539197 MAVSQ7Z434 540 aa6.71□□□□□ -1.34
CCDC7-209ENST00000539197 PPP1R32Q7Z5V6 425 aa6.71□□□□□ -1.34
CCDC7-209ENST00000539197 YTHDF3Q7Z739 585 aaKnown RBP6.71□□□□□ -1.34
CCDC7-209ENST00000539197 PNMA8AQ86V59 439 aaPredicted RBP6.71□□□□□ -1.34
CCDC7-209ENST00000539197 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.71□□□□□ -1.34
CCDC7-209ENST00000539197 TNPO1Q92973 898 aaKnown RBP6.71□□□□□ -1.34
CCDC7-209ENST00000539197 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 SHTN1A0MZ66 631 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 H0YIZ8 118 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 M0QYG6 137 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 FTH1P19P0C7X4 201 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 LIPAP38571 399 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 GCLCP48506 637 aaPredicted RBP6.7□□□□□ -1.34
CCDC7-209ENST00000539197 ZNF134P52741 427 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 EVA1CP58658 441 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 KRT85P78386 507 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 KIF22Q14807 665 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 EFCAB2Q5VUJ9 269 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 ANKRD16Q6P6B7 361 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 ZNF804AQ7Z570 1209 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 USP37Q86T82 979 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms