RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 KLHL23Q8NBE8 558 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 C2orf15Q8WU43 125 aaKnown RBP10.9□□□□□ -0.66
CLPB-210ENST00000539148 CPLX3Q8WVH0 158 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 PIK3R5Q8WYR1 880 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 TATDN2Q93075 761 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 TIFAQ96CG3 184 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 PAAF1Q9BRP4 392 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 PBX4Q9BYU1 374 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 PDCL3Q9H2J4 239 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 SIX2Q9NPC8 291 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 LUC7LQ9NQ29 371 aaKnown RBP10.9□□□□□ -0.66
CLPB-210ENST00000539148 MARCH5Q9NX47 278 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 DDX43Q9NXZ2 648 aaKnown RBP10.9□□□□□ -0.66
CLPB-210ENST00000539148 HESX1Q9UBX0 185 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 STXBP5LQ9Y2K9 1186 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 BACE2Q9Y5Z0 518 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 FHOD1Q9Y613 1164 aa10.9□□□□□ -0.66
CLPB-210ENST00000539148 VWA8A3KMH1 1905 aa10.9□□□□□ -0.67
CLPB-210ENST00000539148 H3BNC9 293 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 GABRDO14764 452 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 PPEF2O14830 753 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 SPTLC1O15269 473 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 CILPO75339 1184 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 GFPT2O94808 682 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 ADH1AP07327 375 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 CCDC175P0C221 793 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 VDRP11473 427 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 CASP14P31944 242 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 NDST1P52848 882 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 DSG1Q02413 1049 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 TAP1Q03518 808 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 GPM6BQ13491 265 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 PSMD5Q16401 504 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 ASIC2Q16515 512 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 MEA1Q16626 185 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 SGO2Q562F6 1265 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 VARS2Q5ST30 1063 aaKnown RBP10.89□□□□□ -0.67
CLPB-210ENST00000539148 WSCD1Q658N2 575 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 CYP26C1Q6V0L0 522 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 LIMS2Q7Z4I7 341 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 ARHGEF19Q8IW93 802 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 FAM71AQ8IYT1 594 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 CRYBG2Q8N1P7 616 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 TC2NQ8N9U0 490 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 RBBP8NLQ8NC74 664 aaPredicted RBP10.89□□□□□ -0.67
CLPB-210ENST00000539148 MSANTD4Q8NCY6 345 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 C3orf58Q8NDZ4 430 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 MICAL1Q8TDZ2 1067 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 RIN2Q8WYP3 895 aaPredicted RBP10.89□□□□□ -0.67
CLPB-210ENST00000539148 RABGGTAQ92696 567 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 TMEM176AQ96HP8 235 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 NOX5Q96PH1 765 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 GPR62Q9BZJ7 368 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 MIS12Q9H081 205 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 PRO3102Q9H379 93 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 SMYD3Q9H7B4 428 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 APOBEC3GQ9HC16 384 aaKnown RBP10.89□□□□□ -0.67
CLPB-210ENST00000539148 ENTPD7Q9NQZ7 604 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 TLR9Q9NR96 1032 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 CHST7Q9NS84 486 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 AIPL1Q9NZN9 384 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 FNIP2Q9P278 1114 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 MYO1AQ9UBC5 1043 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 L1RE1Q9UN81 338 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 POLIQ9UNA4 740 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 CNTN6Q9UQ52 1028 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 IRAK3Q9Y616 596 aa10.89□□□□□ -0.67
CLPB-210ENST00000539148 MTCL1Q9Y4B5 1905 aaKnown RBP10.88□□□□□ -0.67
CLPB-210ENST00000539148 LCHNA4D1U4 455 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 GRXCR1A8MXD5 290 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 MFAP3LO75121 409 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 LRRN2O75325 713 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 NOL4O94818 638 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 GYPCP04921 128 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 SERPING1P05155 500 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 CTSAP10619 480 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 CPB1P15086 417 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 CD19P15391 556 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 TKTP29401 623 aaKnown RBP10.88□□□□□ -0.67
CLPB-210ENST00000539148 CA8P35219 290 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 NDUFV1P49821 464 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 ETF1P62495 437 aaKnown RBP10.88□□□□□ -0.67
CLPB-210ENST00000539148 CDK17Q00537 523 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 KLHL30Q0D2K2 578 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 ARID5BQ14865 1188 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 TPGS2Q68CL5 300 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 TRIM72Q6ZMU5 477 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 RTL10Q7L3V2 364 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 RNF168Q8IYW5 571 aaPredicted RBP10.88□□□□□ -0.67
CLPB-210ENST00000539148 HEXIM2Q96MH2 286 aaKnown RBP10.88□□□□□ -0.67
CLPB-210ENST00000539148 SYT15Q9BQS2 421 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 TTYH3Q9C0H2 523 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 NKX2-4Q9H2Z4 354 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 DEF6Q9H4E7 631 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.88□□□□□ -0.673e-23■■■■■ 559
CLPB-210ENST00000539148 EHD2Q9NZN4 543 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 HSFX1Q9UBD0 423 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 MTRRQ9UBK8 725 aa10.88□□□□□ -0.67
CLPB-210ENST00000539148 MYO9BQ13459 2157 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 LRRC53A6NM62 1247 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms