RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 TNMDQ9H2S6 317 aa9.33□□□□□ -0.92
DDB1-212ENST00000538470 TMEM206Q9H813 350 aa9.33□□□□□ -0.92
DDB1-212ENST00000538470 ITGA11Q9UKX5 1188 aa9.33□□□□□ -0.92
DDB1-212ENST00000538470 NDRG2Q9UN36 371 aaKnown RBP9.33□□□□□ -0.92
DDB1-212ENST00000538470 SMG5Q9UPR3 1016 aaKnown RBP9.33□□□□□ -0.92
DDB1-212ENST00000538470 SPAG17Q6Q759 2223 aa9.33□□□□□ -0.92
DDB1-212ENST00000538470 DCHS1Q96JQ0 3298 aa9.33□□□□□ -0.92
DDB1-212ENST00000538470 SOBPA7XYQ1 873 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 KPNA7A9QM74 516 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 K7ELQ4 463 aaPredicted RBP9.32□□□□□ -0.92
DDB1-212ENST00000538470 DPYSL4O14531 572 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 PAPSS2O95340 614 aaPredicted RBP9.32□□□□□ -0.92
DDB1-212ENST00000538470 HAPLN1P10915 354 aaPredicted RBP9.32□□□□□ -0.92
DDB1-212ENST00000538470 IDEP14735 1019 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 ATF6P18850 670 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 DDX6P26196 483 aaKnown RBP eCLIP9.32□□□□□ -0.92
DDB1-212ENST00000538470 NASPP49321 788 aaPredicted RBP9.32□□□□□ -0.92
DDB1-212ENST00000538470 MTAPQ13126 283 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 SLC39A14Q15043 492 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 NFE2Q16621 373 aaPredicted RBP9.32□□□□□ -0.92
DDB1-212ENST00000538470 MGAT5BQ3V5L5 792 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 GPR158Q5T848 1215 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 RALGPS2Q86X27 583 aaPredicted RBP9.32□□□□□ -0.92
DDB1-212ENST00000538470 ARID3BQ8IVW6 561 aaPredicted RBP9.32□□□□□ -0.92
DDB1-212ENST00000538470 CCDC65Q8IXS2 484 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 TMEM86AQ8N2M4 240 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 FAM200AQ8TCP9 573 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 CACTINQ8WUQ7 758 aaKnown RBP9.32□□□□□ -0.92
DDB1-212ENST00000538470 CLIC6Q96NY7 704 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 LRRC27Q9C0I9 530 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 ATXN3LQ9H3M9 355 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 CUEDC2Q9H467 287 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 TASP1Q9H6P5 420 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 ABCB6Q9NP58 842 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 RBAKQ9NYW8 714 aaPredicted RBP9.32□□□□□ -0.92
DDB1-212ENST00000538470 NCDNQ9UBB6 729 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 MTMR6Q9Y217 621 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 SLC27A5Q9Y2P5 690 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 PCDHB5Q9Y5E4 795 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 KIAA1549LQ6ZVL6 1849 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 DMXL1Q9Y485 3027 aa9.32□□□□□ -0.92
DDB1-212ENST00000538470 RALGAPA1Q6GYQ0 2036 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 MYBPHLA2RUH7 354 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 STX6O43752 255 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 EXTL3O43909 919 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 SOAT2O75908 522 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 ITGB3P05106 788 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 CSH1P0DML2 217 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 CSH2P0DML3 217 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 CHRNB1P11230 501 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 TDGF1P13385 188 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 POLR2BP30876 1174 aaKnown RBP9.31□□□□□ -0.92
DDB1-212ENST00000538470 KPNA1P52294 538 aaPredicted RBP9.31□□□□□ -0.92
DDB1-212ENST00000538470 TFAMQ00059 246 aaKnown RBP9.31□□□□□ -0.92
DDB1-212ENST00000538470 MYL7Q01449 175 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 SURF1Q15526 300 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 TAF12Q16514 161 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 DGKKQ5KSL6 1271 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 STXBP5Q5T5C0 1151 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 WSCD1Q658N2 575 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 SYCP3Q8IZU3 236 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 GPD1LQ8N335 351 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 PDCL2Q8N4E4 241 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 C1orf127Q8N9H9 656 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 BPIFB1Q8TDL5 484 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 RSPRY1Q96DX4 576 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 SAAL1Q96ER3 474 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 USP28Q96RU2 1077 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 LPIN3Q9BQK8 851 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 ACBD6Q9BR61 282 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 FAM213AQ9BRX8 229 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 KIF9Q9HAQ2 790 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 IL21Q9HBE4 155 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 PANK4Q9NVE7 773 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 THG1LQ9NWX6 298 aaKnown RBP9.31□□□□□ -0.92
DDB1-212ENST00000538470 GDAP2Q9NXN4 497 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 ABI2Q9NYB9 513 aaPredicted RBP9.31□□□□□ -0.92
DDB1-212ENST00000538470 UXTQ9UBK9 157 aaPredicted RBP9.31□□□□□ -0.92
DDB1-212ENST00000538470 MYO16Q9Y6X6 1858 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 UBE4BO95155 1302 aa9.31□□□□□ -0.92
DDB1-212ENST00000538470 FRYLO94915 3013 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 SLC38A8A6NNN8 435 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 SPECC1L-ADORA2AF8WAN1 911 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 EIF3DO15371 548 aaKnown RBP eCLIP9.3□□□□□ -0.92
DDB1-212ENST00000538470 HUS1O60921 280 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 PPP6R2O75170 966 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 PRAMEF12O95522 483 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 TMEM191BP0C7N4 346 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 PDIA4P13667 645 aaKnown RBP9.3□□□□□ -0.92
DDB1-212ENST00000538470 SDHBP21912 280 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 CCNE1P24864 410 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 PCSK1P29120 753 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 CTHP32929 405 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 CASP5P51878 434 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 CYP4F8P98187 520 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 CEBPZQ03701 1054 aaKnown RBP9.3□□□□□ -0.92
DDB1-212ENST00000538470 KCNA1Q09470 495 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 BFSP1Q12934 665 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 PUM1Q14671 1186 aaKnown RBP eCLIP9.3□□□□□ -0.92
DDB1-212ENST00000538470 STK38Q15208 465 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms