RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 NRG4Q8WWG1 115 aa14.86□□□□□ -0.03
CLPB-209ENST00000538039 NAF1Q96HR8 494 aaKnown RBP14.86□□□□□ -0.03
CLPB-209ENST00000538039 GMLQ99445 158 aa14.86□□□□□ -0.03
CLPB-209ENST00000538039 POLR3FQ9H1D9 316 aaPredicted RBP14.86□□□□□ -0.03
CLPB-209ENST00000538039 SLC38A10Q9HBR0 1119 aa14.86□□□□□ -0.03
CLPB-209ENST00000538039 FBXO6Q9NRD1 293 aaPredicted RBP14.86□□□□□ -0.03
CLPB-209ENST00000538039 CALB2P22676 271 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 TNFSF9P41273 254 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 BLMHQ13867 455 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 BAATQ14032 418 aaPredicted RBP14.85□□□□□ -0.03
CLPB-209ENST00000538039 SPARCL1Q14515 664 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 RAB6CQ53S08 254 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 TTC7BQ86TV6 843 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 PHF13Q86YI8 300 aaPredicted RBP14.85□□□□□ -0.03
CLPB-209ENST00000538039 ASAP3Q8TDY4 903 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 TFAP2BQ92481 460 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 CFAP57Q96MR6 1250 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 IWS1Q96ST2 819 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 RAB6CQ9H0N0 254 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 ARL8BQ9NVJ2 186 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 CYP39A1Q9NYL5 469 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 hCG_1818297A0A087WSY0 165 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 PEX19P40855 299 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 CDKN2BP42772 138 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 ERFP50548 548 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 PARP6Q2NL67 630 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 EAPPQ56P03 285 aaPredicted RBP14.85□□□□□ -0.03
CLPB-209ENST00000538039 CES4AQ5XG92 561 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 NLRP9Q7RTR0 991 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 CCDC125Q86Z20 511 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 AGGF1Q8N302 714 aaeCLIP14.85□□□□□ -0.031e-6■■■■□ 20.3
CLPB-209ENST00000538039 TCP10LQ8TDR4 215 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 MAIP1Q8WWC4 291 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 NUDCD1Q96RS6 583 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 TARS2Q9BW92 718 aaKnown RBP14.85□□□□□ -0.03
CLPB-209ENST00000538039 CADM1Q9BY67 442 aaKnown RBP14.85□□□□□ -0.03
CLPB-209ENST00000538039 KCNK13Q9HB14 408 aa14.85□□□□□ -0.03
CLPB-209ENST00000538039 COL2A1P02458 1487 aaPredicted RBP14.85□□□□□ -0.03
CLPB-209ENST00000538039 RGPD3A6NKT7 1758 aaPredicted RBP14.84□□□□□ -0.03
CLPB-209ENST00000538039 RGPD4Q7Z3J3 1758 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 E5RJQ4 531 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 PDHA1P08559 390 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 HARSP12081 509 aaKnown RBP14.84□□□□□ -0.03
CLPB-209ENST00000538039 MMP8P22894 467 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 NR1H3Q13133 447 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 PSMD6Q15008 389 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 TDRPQ86YL5 185 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 FBF1Q8TES7 1133 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 LRRN4Q8WUT4 740 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 CPT1BQ92523 772 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 SENP7Q9BQF6 1050 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 CCDC77Q9BR77 488 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 SEPT9Q9UHD8 586 aaPredicted RBP14.84□□□□□ -0.03
CLPB-209ENST00000538039 ZNRF3Q9ULT6 936 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
CLPB-209ENST00000538039 LRRC42Q9Y546 428 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 PCDHA10Q9Y5I2 948 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 DPPA5A6NC42 116 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 A6NHS1 94 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 SPDYE5A6NIY4 337 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 EXTL3O43909 919 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 PEX10O60683 326 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 TMEM63AO94886 807 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 KCNA2P16389 499 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 PTDSS1P48651 473 aaKnown RBP14.84□□□□□ -0.03
CLPB-209ENST00000538039 TRAF1Q13077 416 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 DLGAP5Q15398 846 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 MTERF2Q49AM1 385 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 RGS9BPQ6ZS82 235 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 CLNKQ7Z7G1 428 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 FBXO27Q8NI29 283 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.84□□□□□ -0.03
CLPB-209ENST00000538039 LRRC8CQ8TDW0 803 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 STK32AQ8WU08 396 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 GRAMD1AQ96CP6 724 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 SMC6Q96SB8 1091 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 METTL5Q9NRN9 209 aaKnown RBP14.84□□□□□ -0.03
CLPB-209ENST00000538039 TXLNGQ9NUQ3 528 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 ANKFY1Q9P2R3 1169 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 CYTH4Q9UIA0 394 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 NFASCO94856 1347 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 CNTNAP2Q9UHC6 1331 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 SGK1O00141 431 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 PLCB3Q01970 1234 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 ARHGEF16Q5VV41 709 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 PHC3Q8NDX5 983 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 FAM81BQ96LP2 452 aa14.84□□□□□ -0.03
CLPB-209ENST00000538039 ZNF395Q9H8N7 513 aaPredicted RBP14.84□□□□□ -0.03
CLPB-209ENST00000538039 LRRD1A4D1F6 860 aa14.83□□□□□ -0.04
CLPB-209ENST00000538039 FAM155BO75949 473 aa14.83□□□□□ -0.04
CLPB-209ENST00000538039 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
CLPB-209ENST00000538039 GARTP22102 1010 aa14.83□□□□□ -0.04
CLPB-209ENST00000538039 VCPP55072 806 aaKnown RBP14.83□□□□□ -0.04
CLPB-209ENST00000538039 ORC1Q13415 861 aa14.83□□□□□ -0.04
CLPB-209ENST00000538039 HSF5Q4G112 596 aaPredicted RBP14.83□□□□□ -0.04
CLPB-209ENST00000538039 WDR44Q5JSH3 913 aa14.83□□□□□ -0.04
CLPB-209ENST00000538039 RSBN1LQ6PCB5 846 aaPredicted RBP14.83□□□□□ -0.04
CLPB-209ENST00000538039 UNC45BQ8IWX7 931 aa14.83□□□□□ -0.04
CLPB-209ENST00000538039 SHKBP1Q8TBC3 707 aa14.83□□□□□ -0.04
CLPB-209ENST00000538039 SERAC1Q96JX3 654 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms